RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, human

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THUMPD3-208	ENST00000464045	ATP5L2	Q7Z4Y8	100 aa		4.88	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TRBV24-1	A0A075B6N3	115 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045		A0A1B0GXF2	115 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	USP17L23	D6RBM5	183 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	VCY	O14598	125 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TCAP	O15273	167 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	GAS8-AS1	O95177	125 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TSHB	P01222	138 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	HLA-DQA1	P01909	254 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	MT-ND4L	P03901	98 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	FGF6	P10767	208 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	ESD	P10768	282 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	RPS10	P46783	165 aa	Known RBP	4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CAMP	P49913	170 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	SUMO2	P61956	95 aa	Known RBP	4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	RPL32	P62910	135 aa	Known RBP	4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	HAMP	P81172	84 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	SMAGP	Q0VAQ4	97 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	ODF1	Q14990	250 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	KRTAP26-1	Q6PEX3	210 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CLPSL2	Q6UWE3	100 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	NRAC	Q8N912	160 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	C20orf78	Q9BR46	151 aa		4.87	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	EPM2A	B3EWF7	344 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	PHOX2A	O14813	284 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	PPBP	P02775	128 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	MRPL51	Q4U2R6	128 aa	Known RBP	4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	DGAT2L7P	Q6IED9	249 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	RNASEK	Q6P5S7	137 aa	Known RBP	4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045		Q6ZSA8	131 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	MRPL52	Q86TS9	123 aa	Known RBP	4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	DEFB104A	Q8WTQ1	72 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TMEM101	Q96IK0	257 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	BTF3L4	Q96K17	158 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	KIR2DL4	Q99706	377 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TMEM242	Q9NWH2	141 aa		4.86	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IGLV10-54	A0A075B6I4	117 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	C7orf77	A4D0Y5	90 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	SMKR1	H3BMG3	65 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	SMR3B	P02814	79 aa	Predicted RBP	4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	INAFM2	P0DMQ5	153 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	FCER1G	P30273	86 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CKS2	P33552	79 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IFITM2	Q01629	132 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	MRPL54	Q6P161	138 aa	Known RBP	4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	OR5A1	Q8NGJ0	315 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CDIP1	Q9H305	208 aa		4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CSDC2	Q9Y534	153 aa	Known RBP	4.85	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TMEM218	A2RU14	115 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TNFRSF6B	O95407	300 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	PRSS1	P07477	247 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CNBP	P62633	177 aa	Known RBP	4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	CFAP161	Q6P656	301 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	TMEM18	Q96B42	140 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	IMMP2L	Q96T52	175 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045	FAM30A	Q9NZY2	134 aa		4.84	□□□□□ -1.63
THUMPD3-208	ENST00000464045		D6R8Y8	96 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CCL25	O15444	150 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045		Q5VSD8	79 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	ORMDL3	Q8N138	153 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	ZNF664	Q8N3J9	261 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	C9orf163	Q8N9P6	203 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	TIMM21	Q9BVV7	248 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	SMIM2	Q9BVW6	85 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CTDSP1	Q9GZU7	261 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CDC42SE2	Q9NRR3	84 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	LAMTOR2	Q9Y2Q5	125 aa		4.83	□□□□□ -1.64
THUMPD3-208	ENST00000464045	TRAV9-1	A0A075B6T8	112 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	LINC00959	A0A1B0GUT2	108 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	hDV102S1	A0JD36	115 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	GAGE12H	A6NDE8	117 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	PRSS47	A8MTI9	375 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	ADCYAP1	P18509	176 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	TMEM136	Q6ZRR5	245 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CHAC1	Q9BUX1	264 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	SEC11C	Q9BY50	192 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	KRTAP4-11	Q9BYQ6	195 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	UBE2D4	Q9Y2X8	147 aa		4.82	□□□□□ -1.64
THUMPD3-208	ENST00000464045	IGKV3OR2-268	A0A0C4DH90	116 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	NPY	P01303	97 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	FOXI1	Q12951	378 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	SS18	Q15532	418 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	LINC01620	Q4KN68	170 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	CD164L2	Q6UWJ8	174 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	COMMD7	Q86VX2	200 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	C15orf56	Q8N910	161 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	PRELID3A	Q96N28	172 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	SPANXA1	Q9NS26	97 aa		4.81	□□□□□ -1.64
THUMPD3-208	ENST00000464045	IGHV3-64	A0A075B6Q5	118 aa		4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045	C1orf196	B1AJZ1	125 aa		4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045		K7EMI3	77 aa		4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045	RAB5A	P20339	215 aa		4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045	XCL1	P47992	114 aa		4.8	□□□□□ -1.64
THUMPD3-208	ENST00000464045	MRPS36	P82909	103 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms