RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 WFDC2Q14508 124 aa8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 MRPL52Q86TS9 123 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 RPS10P5Q9NQ39 176 aa8.61□□□□□ -1.03
R3HDM1-213ENST00000463230 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 FGF6P10767 208 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 TRAV9-1A0A075B6T8 112 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 FCER1GP30273 86 aa8.6□□□□□ -1.03
R3HDM1-213ENST00000463230 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
R3HDM1-213ENST00000463230 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
R3HDM1-213ENST00000463230 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
R3HDM1-213ENST00000463230 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
R3HDM1-213ENST00000463230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 ORMDL3Q8N138 153 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 LECT2O14960 151 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 OR5A1Q8NGJ0 315 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 TMEM18Q96B42 140 aa8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
R3HDM1-213ENST00000463230 D6R8Y8 96 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 FUSP35637 526 aaKnown RBP eCLIP8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
R3HDM1-213ENST00000463230 COLCA2A8K830 154 aa8.56□□□□□ -1.04
R3HDM1-213ENST00000463230 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
R3HDM1-213ENST00000463230 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
R3HDM1-213ENST00000463230 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
R3HDM1-213ENST00000463230 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
R3HDM1-213ENST00000463230 RYR1P21817 5038 aa8.55□□□□□ -1.04
R3HDM1-213ENST00000463230 CCL25O15444 150 aa8.55□□□□□ -1.04
R3HDM1-213ENST00000463230 NPYP01303 97 aa8.55□□□□□ -1.04
R3HDM1-213ENST00000463230 PRELID3AQ96N28 172 aa8.55□□□□□ -1.04
R3HDM1-213ENST00000463230 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 RHEBQ15382 184 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 CDC42SE2Q9NRR3 84 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 IGLV10-54A0A075B6I4 117 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 S100PP25815 95 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 Q8N1X5 172 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 ZNF664Q8N3J9 261 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 DNAH5Q8TE73 4624 aa8.54□□□□□ -1.04
R3HDM1-213ENST00000463230 COX19Q49B96 90 aa8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 Q6ZSA8 131 aa8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 PRSS1P07477 247 aa8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 XGP55808 180 aa8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
R3HDM1-213ENST00000463230 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 SS18Q15532 418 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 MAP1LC3AQ9H492 121 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 SPANXA1Q9NS26 97 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 K7EMI3 77 aa8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
R3HDM1-213ENST00000463230 RAB5AP20339 215 aa8.51□□□□□ -1.05
R3HDM1-213ENST00000463230 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
R3HDM1-213ENST00000463230 AKR1D1P51857 326 aa8.5□□□□□ -1.05
R3HDM1-213ENST00000463230 HSPG2P98160 4391 aa8.5□□□□□ -1.05
R3HDM1-213ENST00000463230 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-213ENST00000463230 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 Q8N8P6 123 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 GNB1LQ9BYB4 327 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 FOXI1Q12951 378 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 CD164L2Q6UWJ8 174 aa8.49□□□□□ -1.05
R3HDM1-213ENST00000463230 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 hDV102S1A0JD36 115 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 MT-ND6P03923 174 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 NXT2Q9NPJ8 142 aaKnown RBP8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 GVQW2A0A096LPI5 108 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 G0S2P27469 103 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 RAB5BP61020 215 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
R3HDM1-213ENST00000463230 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
R3HDM1-213ENST00000463230 NPSP0C0P6 89 aa8.47□□□□□ -1.05
R3HDM1-213ENST00000463230 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
R3HDM1-213ENST00000463230 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
R3HDM1-213ENST00000463230 XCL1P47992 114 aa8.46□□□□□ -1.05
R3HDM1-213ENST00000463230 Q6ZUT4 128 aa8.46□□□□□ -1.05
R3HDM1-213ENST00000463230 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.05
R3HDM1-213ENST00000463230 TGIF2-C20orf24A0A0A6YYL0 155 aa8.46□□□□□ -1.06
R3HDM1-213ENST00000463230 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.06
R3HDM1-213ENST00000463230 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.06
R3HDM1-213ENST00000463230 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
R3HDM1-213ENST00000463230 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
R3HDM1-213ENST00000463230 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms