RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RPS10P46783 165 aaKnown RBP12.7□□□□□ -0.38
VARS-221ENST00000463184 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
VARS-221ENST00000463184 PPBPP02775 128 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 RBX1P62877 108 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 COTL1Q14019 142 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 SDIM1Q6ZPB5 146 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 NRACQ8N912 160 aa12.69□□□□□ -0.38
VARS-221ENST00000463184 TRBV25-1A0A075B6N4 114 aa12.68□□□□□ -0.38
VARS-221ENST00000463184 IGHV1-24A0A0C4DH33 117 aa12.68□□□□□ -0.38
VARS-221ENST00000463184 IQCJQ1A5X6 159 aa12.68□□□□□ -0.38
VARS-221ENST00000463184 KRTAP26-1Q6PEX3 210 aa12.68□□□□□ -0.38
VARS-221ENST00000463184 Q6ZRU5 148 aa12.68□□□□□ -0.38
VARS-221ENST00000463184 D6R8Y8 96 aa12.67□□□□□ -0.38
VARS-221ENST00000463184 I3L3M4 83 aa12.67□□□□□ -0.38
VARS-221ENST00000463184 PMCHP20382 165 aa12.67□□□□□ -0.38
VARS-221ENST00000463184 POLR2KP53803 58 aaKnown RBP12.67□□□□□ -0.38
VARS-221ENST00000463184 GAGE6Q13070 117 aa12.67□□□□□ -0.38
VARS-221ENST00000463184 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
VARS-221ENST00000463184 TRBV24-1A0A075B6N3 115 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 PANO1I0J062 215 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
VARS-221ENST00000463184 COX19Q49B96 90 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 TMEM136Q6ZRR5 245 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 ORMDL3Q8N138 153 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
VARS-221ENST00000463184 PHOX2AO14813 284 aa12.65□□□□□ -0.38
VARS-221ENST00000463184 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
VARS-221ENST00000463184 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
VARS-221ENST00000463184 TRBV27A0A0K0K1C4 114 aa12.64□□□□□ -0.39
VARS-221ENST00000463184 VCYO14598 125 aa12.64□□□□□ -0.39
VARS-221ENST00000463184 AMTP48728 403 aa12.64□□□□□ -0.39
VARS-221ENST00000463184 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
VARS-221ENST00000463184 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
VARS-221ENST00000463184 TMEM243Q9BU79 118 aa12.64□□□□□ -0.39
VARS-221ENST00000463184 GNB1LQ9BYB4 327 aa12.64□□□□□ -0.39
VARS-221ENST00000463184 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
VARS-221ENST00000463184 REG3AQ06141 175 aa12.63□□□□□ -0.39
VARS-221ENST00000463184 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
VARS-221ENST00000463184 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
VARS-221ENST00000463184 NPYP01303 97 aa12.62□□□□□ -0.39
VARS-221ENST00000463184 APCSP02743 223 aa12.62□□□□□ -0.39
VARS-221ENST00000463184 LAMTOR2Q9Y2Q5 125 aa12.62□□□□□ -0.39
VARS-221ENST00000463184 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
VARS-221ENST00000463184 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
VARS-221ENST00000463184 TSHBP01222 138 aa12.61□□□□□ -0.39
VARS-221ENST00000463184 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
VARS-221ENST00000463184 IGHV3-64A0A075B6Q5 118 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 UBE2L6O14933 153 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 MT-ND6P03923 174 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
VARS-221ENST00000463184 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
VARS-221ENST00000463184 A0A1B0GUV1 79 aa12.59□□□□□ -0.39
VARS-221ENST00000463184 C20orf203Q8NBC4 194 aa12.59□□□□□ -0.39
VARS-221ENST00000463184 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
VARS-221ENST00000463184 SMCO4Q9NRQ5 59 aa12.59□□□□□ -0.39
VARS-221ENST00000463184 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
VARS-221ENST00000463184 H7C423 109 aa12.58□□□□□ -0.4
VARS-221ENST00000463184 TCAPO15273 167 aa12.58□□□□□ -0.4
VARS-221ENST00000463184 FCER1GP30273 86 aa12.58□□□□□ -0.4
VARS-221ENST00000463184 A0A087WYN8 130 aa12.57□□□□□ -0.4
VARS-221ENST00000463184 ESDP10768 282 aa12.57□□□□□ -0.4
VARS-221ENST00000463184 KIAA1644Q3SXP7 199 aa12.57□□□□□ -0.4
VARS-221ENST00000463184 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
VARS-221ENST00000463184 SLPIP03973 132 aa12.56□□□□□ -0.4
VARS-221ENST00000463184 MRPL18Q9H0U6 180 aaKnown RBP12.56□□□□□ -0.4
VARS-221ENST00000463184 MAP1LC3AQ9H492 121 aa12.56□□□□□ -0.4
VARS-221ENST00000463184 IGLV4-60A0A075B6I1 120 aa12.55□□□□□ -0.4
VARS-221ENST00000463184 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
VARS-221ENST00000463184 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
VARS-221ENST00000463184 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
VARS-221ENST00000463184 CBLN2Q8IUK8 224 aa12.55□□□□□ -0.4
VARS-221ENST00000463184 SPACA4Q8TDM5 124 aa12.55□□□□□ -0.4
VARS-221ENST00000463184 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
VARS-221ENST00000463184 LOC389332A0A1B0GUA5 103 aa12.53□□□□□ -0.4
VARS-221ENST00000463184 CHTF8P0CG12 524 aa12.53□□□□□ -0.4
VARS-221ENST00000463184 AMMECR1LQ6DCA0 310 aa12.53□□□□□ -0.4
VARS-221ENST00000463184 FGF6P10767 208 aa12.52□□□□□ -0.41
VARS-221ENST00000463184 RAB5AP20339 215 aa12.52□□□□□ -0.41
VARS-221ENST00000463184 Q8N8P6 123 aa12.52□□□□□ -0.41
VARS-221ENST00000463184 C7orf33Q8WU49 177 aa12.52□□□□□ -0.41
VARS-221ENST00000463184 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.41
VARS-221ENST00000463184 PLAC8Q9NZF1 115 aa12.52□□□□□ -0.41
VARS-221ENST00000463184 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
VARS-221ENST00000463184 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
VARS-221ENST00000463184 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
VARS-221ENST00000463184 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
VARS-221ENST00000463184 SMAGPQ0VAQ4 97 aa12.5□□□□□ -0.41
VARS-221ENST00000463184 MRPL52Q86TS9 123 aaKnown RBP12.5□□□□□ -0.41
VARS-221ENST00000463184 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
VARS-221ENST00000463184 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
VARS-221ENST00000463184 K7EMI3 77 aa12.48□□□□□ -0.41
VARS-221ENST00000463184 IFI27P40305 119 aaPredicted RBP12.47□□□□□ -0.41
VARS-221ENST00000463184 COX6A2Q02221 97 aa12.47□□□□□ -0.41
VARS-221ENST00000463184 C15orf56Q8N910 161 aa12.47□□□□□ -0.41
VARS-221ENST00000463184 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
VARS-221ENST00000463184 TNXBP22105 4242 aa12.47□□□□□ -0.41
VARS-221ENST00000463184 GAGE12HA6NDE8 117 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms