RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 KDM5AP29375 1690 aaKnown RBP0.83□□□□□ -2.28
GPNMB-205ENST00000463011 VPS8Q8N3P4 1428 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 MYOM1P52179 1685 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 PIN1P1O15428 100 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 SEC11AP67812 179 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 CCNB3Q8WWL7 1395 aa0.82□□□□□ -2.28
GPNMB-205ENST00000463011 FCGBPQ9Y6R7 5405 aaPredicted RBP0.81□□□□□ -2.28
GPNMB-205ENST00000463011 MT-ATP8P03928 68 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 COX6CP09669 75 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 TRAPPC2P0DI81 140 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 TRAPPC2BP0DI82 140 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 SSBP3-AS1Q7Z2R9 100 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 FAM223AQ8IWN6 122 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 NXT2Q9NPJ8 142 aaKnown RBP0.81□□□□□ -2.28
GPNMB-205ENST00000463011 AP4S1Q9Y587 144 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 ARL2-SNX15V9GYD0 113 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 ARHGEF5Q12774 1597 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 TENM1Q9UKZ4 2725 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 TOP2BQ02880 1626 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 KIF21AQ7Z4S6 1674 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 TOPAZ1Q8N9V7 1692 aa0.81□□□□□ -2.28
GPNMB-205ENST00000463011 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
GPNMB-205ENST00000463011 ZNF815PA8K554 130 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 HAMPP81172 84 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 PLAC8Q9NZF1 115 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 FBN3Q75N90 2809 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 ZNF236Q9UL36 1845 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 ABCC10Q5T3U5 1492 aa0.8□□□□□ -2.28
GPNMB-205ENST00000463011 EHBP1L1Q8N3D4 1523 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 UNC13BO14795 1591 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 IGLC1P0CG04 106 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 PMCHL2Q9BQD1 86 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 LINC00472Q9H8W2 130 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 FAIMQ9NVQ4 179 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 PSME4Q14997 1843 aa0.79□□□□□ -2.28
GPNMB-205ENST00000463011 ZNF462Q96JM2 2506 aa0.78□□□□□ -2.28
GPNMB-205ENST00000463011 M0R3E3 92 aa0.78□□□□□ -2.28
GPNMB-205ENST00000463011 COX6A2Q02221 97 aa0.78□□□□□ -2.28
GPNMB-205ENST00000463011 FYCO1Q9BQS8 1478 aa0.78□□□□□ -2.28
GPNMB-205ENST00000463011 HMGXB3Q12766 1538 aa0.78□□□□□ -2.28
GPNMB-205ENST00000463011 FAM223BA6NKX1 122 aa0.77□□□□□ -2.29
GPNMB-205ENST00000463011 MGPP08493 103 aa0.77□□□□□ -2.29
GPNMB-205ENST00000463011 PKIAP61925 76 aa0.77□□□□□ -2.29
GPNMB-205ENST00000463011 Q6JHZ5 121 aa0.77□□□□□ -2.29
GPNMB-205ENST00000463011 ABCA3Q99758 1704 aa0.77□□□□□ -2.29
GPNMB-205ENST00000463011 LRRC37A2A6NM11 1700 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 CHD1O14646 1710 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 DIP2CQ9Y2E4 1556 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 ANKRD36BQ8N2N9 1353 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 A0A0G2JND7 137 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 C10orf142B7Z368 130 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 LINC00032P0C843 101 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 UBA52P62987 128 aaKnown RBP0.76□□□□□ -2.29
GPNMB-205ENST00000463011 COL5A1-AS1Q5SY13 56 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 SNHG12Q9BXW3 62 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 DPY30Q9C005 99 aa0.76□□□□□ -2.29
GPNMB-205ENST00000463011 GAPVD1Q14C86 1478 aa0.75□□□□□ -2.29
GPNMB-205ENST00000463011 TEX14Q8IWB6 1497 aa0.75□□□□□ -2.29
GPNMB-205ENST00000463011 JMJD1CQ15652 2540 aa0.75□□□□□ -2.29
GPNMB-205ENST00000463011 PRDM15P57071 1507 aaPredicted RBP0.74□□□□□ -2.29
GPNMB-205ENST00000463011 FSIP2Q5CZC0 6907 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 NDUFC1O43677 76 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 VAMP8Q9BV40 100 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 PI4KAP42356 2102 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 LRP6O75581 1613 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 KCPQ6ZWJ8 1503 aa0.74□□□□□ -2.29
GPNMB-205ENST00000463011 SCN7AQ01118 1682 aa0.73□□□□□ -2.29
GPNMB-205ENST00000463011 ATOX1O00244 68 aa0.73□□□□□ -2.29
GPNMB-205ENST00000463011 CACFD1Q9UGQ2 172 aa0.73□□□□□ -2.29
GPNMB-205ENST00000463011 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
GPNMB-205ENST00000463011 ERCC6L2Q5T890 1561 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 A0A1B0GWA3 101 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 BCE1O60756 84 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 SAA2P0DJI9 122 aaPredicted RBP0.72□□□□□ -2.29
GPNMB-205ENST00000463011 SPRR4Q96PI1 79 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 ADGRL2O95490 1459 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 MLH3Q9UHC1 1453 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 NSD3Q9BZ95 1437 aa0.72□□□□□ -2.29
GPNMB-205ENST00000463011 RAPGEF6Q8TEU7 1601 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 DOCK11Q5JSL3 2073 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
GPNMB-205ENST00000463011 A0A0D9SFI3 127 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 PRH1P02810 166 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 S100A3P33764 101 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 ASIPP42127 132 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 PRO0255Q9UI72 69 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
GPNMB-205ENST00000463011 MAGI1Q96QZ7 1491 aaPredicted RBP0.7□□□□□ -2.3
GPNMB-205ENST00000463011 SERP2Q8N6R1 65 aa0.7□□□□□ -2.3
GPNMB-205ENST00000463011 TMEM263Q8WUH6 116 aaKnown RBP0.7□□□□□ -2.3
GPNMB-205ENST00000463011 CNFNQ9BYD5 112 aa0.7□□□□□ -2.3
GPNMB-205ENST00000463011 SMARCA2P51531 1590 aa0.7□□□□□ -2.3
GPNMB-205ENST00000463011 TCHHQ07283 1943 aa0.7□□□□□ -2.3
GPNMB-205ENST00000463011 NEBP20929 6669 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 FBN2P35556 2912 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 SBF2Q86WG5 1849 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 H7BZZ5 65 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 FAUP35544 74 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms