RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 CTRLP40313 264 aa12.01□□□□□ -0.49
PTPN18-208ENST00000462996 TWIST1Q15672 202 aa12.01□□□□□ -0.49
PTPN18-208ENST00000462996 EIF5AL1Q6IS14 154 aaKnown RBP12.01□□□□□ -0.49
PTPN18-208ENST00000462996 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
PTPN18-208ENST00000462996 BCL2L11O43521 198 aa12□□□□□ -0.49
PTPN18-208ENST00000462996 MALP21145 153 aa12□□□□□ -0.49
PTPN18-208ENST00000462996 MUC17Q685J3 4493 aa12□□□□□ -0.49
PTPN18-208ENST00000462996 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
PTPN18-208ENST00000462996 RPL13AP40429 203 aaKnown RBP11.99□□□□□ -0.49
PTPN18-208ENST00000462996 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
PTPN18-208ENST00000462996 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
PTPN18-208ENST00000462996 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
PTPN18-208ENST00000462996 CNFNQ9BYD5 112 aa11.99□□□□□ -0.49
PTPN18-208ENST00000462996 RAB19A4D1S5 217 aa11.98□□□□□ -0.49
PTPN18-208ENST00000462996 COX7A2LO14548 114 aa11.98□□□□□ -0.49
PTPN18-208ENST00000462996 TSPAN13O95857 204 aa11.98□□□□□ -0.49
PTPN18-208ENST00000462996 PMCHP20382 165 aa11.98□□□□□ -0.49
PTPN18-208ENST00000462996 G3V3Q6 166 aa11.97□□□□□ -0.49
PTPN18-208ENST00000462996 I3L3M4 83 aa11.97□□□□□ -0.49
PTPN18-208ENST00000462996 TSHBP01222 138 aa11.97□□□□□ -0.49
PTPN18-208ENST00000462996 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
PTPN18-208ENST00000462996 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
PTPN18-208ENST00000462996 TSKUQ8WUA8 353 aa11.95□□□□□ -0.5
PTPN18-208ENST00000462996 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
PTPN18-208ENST00000462996 C1orf196B1AJZ1 125 aa11.94□□□□□ -0.5
PTPN18-208ENST00000462996 ARPC5O15511 151 aa11.94□□□□□ -0.5
PTPN18-208ENST00000462996 GNG4P50150 75 aa11.94□□□□□ -0.5
PTPN18-208ENST00000462996 CCL20P78556 96 aa11.94□□□□□ -0.5
PTPN18-208ENST00000462996 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
PTPN18-208ENST00000462996 TRBV20OR9-2A0A075B6H5 130 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 KRTAP7-1Q8IUC3 87 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
PTPN18-208ENST00000462996 CARHSP1Q9Y2V2 147 aaKnown RBP11.93□□□□□ -0.5
PTPN18-208ENST00000462996 TEX261Q6UWH6 196 aa11.92□□□□□ -0.5
PTPN18-208ENST00000462996 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
PTPN18-208ENST00000462996 RNASE7Q9H1E1 156 aaKnown RBP11.92□□□□□ -0.5
PTPN18-208ENST00000462996 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
PTPN18-208ENST00000462996 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
PTPN18-208ENST00000462996 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
PTPN18-208ENST00000462996 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
PTPN18-208ENST00000462996 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
PTPN18-208ENST00000462996 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
PTPN18-208ENST00000462996 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
PTPN18-208ENST00000462996 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
PTPN18-208ENST00000462996 C7orf77A4D0Y5 90 aa11.87□□□□□ -0.51
PTPN18-208ENST00000462996 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
PTPN18-208ENST00000462996 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
PTPN18-208ENST00000462996 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
PTPN18-208ENST00000462996 RPP21Q9H633 154 aaKnown RBP11.87□□□□□ -0.51
PTPN18-208ENST00000462996 BIN3Q9NQY0 253 aa11.87□□□□□ -0.51
PTPN18-208ENST00000462996 FSIP2Q5CZC0 6907 aa11.86□□□□□ -0.51
PTPN18-208ENST00000462996 UBE2BP63146 152 aa11.86□□□□□ -0.51
PTPN18-208ENST00000462996 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
PTPN18-208ENST00000462996 M0QXV9 152 aa11.85□□□□□ -0.51
PTPN18-208ENST00000462996 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
PTPN18-208ENST00000462996 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
PTPN18-208ENST00000462996 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
PTPN18-208ENST00000462996 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
PTPN18-208ENST00000462996 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
PTPN18-208ENST00000462996 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
PTPN18-208ENST00000462996 UBE2D4Q9Y2X8 147 aa11.84□□□□□ -0.51
PTPN18-208ENST00000462996 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
PTPN18-208ENST00000462996 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
PTPN18-208ENST00000462996 MED9Q9NWA0 146 aa11.83□□□□□ -0.52
PTPN18-208ENST00000462996 CRCT1Q9UGL9 99 aa11.83□□□□□ -0.52
PTPN18-208ENST00000462996 A0A087X002 238 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 ZNF861PO60384 105 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 ORAOV1Q8WV07 137 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 SMDT1Q9H4I9 107 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
PTPN18-208ENST00000462996 F8WDY8 70 aa11.81□□□□□ -0.52
PTPN18-208ENST00000462996 K7EN84 100 aa11.81□□□□□ -0.52
PTPN18-208ENST00000462996 NDUFA1O15239 70 aa11.81□□□□□ -0.52
PTPN18-208ENST00000462996 PDE6DO43924 150 aa11.8□□□□□ -0.52
PTPN18-208ENST00000462996 TMEM241Q24JQ0 296 aa11.8□□□□□ -0.52
PTPN18-208ENST00000462996 Q6ZUT4 128 aa11.8□□□□□ -0.52
PTPN18-208ENST00000462996 ZNF345Q14585 488 aa11.79□□□□□ -0.52
PTPN18-208ENST00000462996 RETNLBQ9BQ08 111 aa11.79□□□□□ -0.52
PTPN18-208ENST00000462996 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
PTPN18-208ENST00000462996 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
PTPN18-208ENST00000462996 IGHV3OR16-9A0A0B4J2B5 98 aa11.76□□□□□ -0.53
PTPN18-208ENST00000462996 FCER1GP30273 86 aa11.76□□□□□ -0.53
PTPN18-208ENST00000462996 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
PTPN18-208ENST00000462996 TYMSOSQ8TAI1 123 aa11.76□□□□□ -0.53
PTPN18-208ENST00000462996 VCYO14598 125 aa11.75□□□□□ -0.53
PTPN18-208ENST00000462996 RAB4AP20338 218 aa11.74□□□□□ -0.53
PTPN18-208ENST00000462996 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
PTPN18-208ENST00000462996 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
PTPN18-208ENST00000462996 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
PTPN18-208ENST00000462996 SMKR1H3BMG3 65 aa11.73□□□□□ -0.53
PTPN18-208ENST00000462996 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
PTPN18-208ENST00000462996 TMEM191AQ9H0A3 160 aa11.73□□□□□ -0.53
PTPN18-208ENST00000462996 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms