RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 CCL17Q92583 94 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
LINC01140-201ENST00000461990 CRPP02741 224 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 FAM74A4Q5TZK3 123 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 WFDC9Q8NEX5 89 aa6.62□□□□□ -1.35
LINC01140-201ENST00000461990 TPRP12270 2363 aaKnown RBP6.62□□□□□ -1.35
LINC01140-201ENST00000461990 IGHV7-81A0A0B4J1V7 117 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 BOD1L1Q8NFC6 3051 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 IGHV3OR16-13A0A075B7E8 117 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 IGHV3-74A0A0B4J1X5 117 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 SEM1Q6ZVN7 128 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 CHCHD7Q9BUK0 85 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 TRBV7-4A0A0J9YYF1 115 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 PRB3Q04118 309 aaPredicted RBP6.61□□□□□ -1.35
LINC01140-201ENST00000461990 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 SMIM11BQ8TCY0 68 aa6.61□□□□□ -1.35
LINC01140-201ENST00000461990 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 ODF3BA8MYP8 253 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 SNRPD3P62318 126 aaKnown RBP6.6□□□□□ -1.35
LINC01140-201ENST00000461990 LPAL2Q16609 132 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.6□□□□□ -1.35
LINC01140-201ENST00000461990 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 CACNA1AO00555 2505 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 CCL21O00585 134 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
LINC01140-201ENST00000461990 POLEQ07864 2286 aa6.59□□□□□ -1.35
LINC01140-201ENST00000461990 IGHV3-49A0A0A0MS15 119 aa6.59□□□□□ -1.35
LINC01140-201ENST00000461990 CLEC19AQ6UXS0 136 aa6.59□□□□□ -1.35
LINC01140-201ENST00000461990 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
LINC01140-201ENST00000461990 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
LINC01140-201ENST00000461990 SMIM1B2RUZ4 78 aa6.59□□□□□ -1.36
LINC01140-201ENST00000461990 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.36
LINC01140-201ENST00000461990 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.36
LINC01140-201ENST00000461990 ZFHX2Q9C0A1 2572 aaPredicted RBP6.59□□□□□ -1.36
LINC01140-201ENST00000461990 LECT2O14960 151 aa6.58□□□□□ -1.36
LINC01140-201ENST00000461990 MIFP14174 115 aa6.58□□□□□ -1.36
LINC01140-201ENST00000461990 SAA4P35542 130 aa6.58□□□□□ -1.36
LINC01140-201ENST00000461990 ZFHX4Q86UP3 3567 aa6.58□□□□□ -1.36
LINC01140-201ENST00000461990 ESRGQ1W209 222 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 MINOS1Q5TGZ0 78 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 MOB4Q9Y3A3 225 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 TMEM89A2RUT3 159 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 COX6A2Q02221 97 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 Q96MF0 132 aa6.57□□□□□ -1.36
LINC01140-201ENST00000461990 TRAV10A0A0B4J240 114 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 F6UB75 175 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 DEFB1P60022 68 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 Q8N9W7 124 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 DCHS1Q96JQ0 3298 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 LY6G6DO95868 133 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 CXCL6P80162 114 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 LINC00242Q5T6M2 205 aa6.56□□□□□ -1.36
LINC01140-201ENST00000461990 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 PTPRZ1P23471 2315 aaPredicted RBP6.55□□□□□ -1.36
LINC01140-201ENST00000461990 PATE3B3GLJ2 98 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 SND1-IT1Q9HBX3 110 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 RIF1Q5UIP0 2472 aaKnown RBP6.55□□□□□ -1.36
LINC01140-201ENST00000461990 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 MPLKIPQ8TAP9 179 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
LINC01140-201ENST00000461990 LINC01547P58512 204 aaPredicted RBP6.54□□□□□ -1.36
LINC01140-201ENST00000461990 PLCE1Q9P212 2302 aa6.54□□□□□ -1.36
LINC01140-201ENST00000461990 IGHV3OR16-12A0A075B7B8 117 aa6.54□□□□□ -1.36
LINC01140-201ENST00000461990 NDUFA4O00483 81 aa6.54□□□□□ -1.36
LINC01140-201ENST00000461990 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
LINC01140-201ENST00000461990 Q1T7F1 81 aa6.54□□□□□ -1.36
LINC01140-201ENST00000461990 Q8NA96 180 aa6.54□□□□□ -1.36
LINC01140-201ENST00000461990 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
LINC01140-201ENST00000461990 LOC110117498A0A087WWA1 95 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 PAX4O43316 350 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 RETNQ9HD89 108 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 NBASA2RRP1 2371 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 ATP6V0E1O15342 81 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 LAMA5O15230 3695 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-201ENST00000461990 ADORA2A-AS1P86434 159 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 Q6ZTC4 211 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
LINC01140-201ENST00000461990 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 SLPIP03973 132 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 ECSCRQ19T08 205 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 PCNX1Q96RV3 2341 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 KALRNO60229 2985 aa6.52□□□□□ -1.37
LINC01140-201ENST00000461990 Q6ZQT0 140 aa6.51□□□□□ -1.37
LINC01140-201ENST00000461990 DEFB124Q8NES8 71 aa6.51□□□□□ -1.37
LINC01140-201ENST00000461990 LINC01560Q8TB33 94 aa6.51□□□□□ -1.37
LINC01140-201ENST00000461990 FAM215AQ9Y5M1 114 aa6.51□□□□□ -1.37
LINC01140-201ENST00000461990 A0A1W2PNU3 283 aaPredicted RBP6.51□□□□□ -1.37
LINC01140-201ENST00000461990 TM2D3Q9BRN9 247 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms