RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DOPEY2Q9Y3R5 2298 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 MAST4O15021 2626 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 MYOM2P54296 1465 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 C2CD3Q4AC94 2353 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 TRAV22A0A0B4J277 110 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 UBE2L5PA0A1B0GUS4 154 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 UQCR11O14957 56 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 CFDP00746 253 aaPredicted RBP0.3□□□□□ -2.36
VCL-203ENST00000461383 PPP3R1P63098 170 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 UBE2L3P68036 154 aaKnown RBP0.3□□□□□ -2.36
VCL-203ENST00000461383 UQCR10Q9UDW1 63 aa0.3□□□□□ -2.36
VCL-203ENST00000461383 MYO7BQ6PIF6 2116 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 ERCC6L2Q5T890 1561 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 IGLC7A0M8Q6 106 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 CORTO00230 105 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 HMGN4O00479 90 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 ATP5EP56381 51 aaPredicted RBP0.29□□□□□ -2.36
VCL-203ENST00000461383 AMELXQ99217 191 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 C2orf88Q9BSF0 95 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 IER3IP1Q9Y5U9 82 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 ANK2Q01484 3957 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 OTOGQ6ZRI0 2925 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 BTAF1O14981 1849 aa0.29□□□□□ -2.36
VCL-203ENST00000461383 CHKB-CPT1BH3BT56 60 aa0.28□□□□□ -2.36
VCL-203ENST00000461383 GNG11P61952 73 aa0.28□□□□□ -2.36
VCL-203ENST00000461383 LINC00474Q9P2X8 69 aa0.28□□□□□ -2.36
VCL-203ENST00000461383 U3KQA8 63 aa0.28□□□□□ -2.36
VCL-203ENST00000461383 PKDREJQ9NTG1 2253 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 M0R3E3 92 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 Q6JHZ5 121 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 DPH3P1Q9H4G8 78 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 FAIMQ9NVQ4 179 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 LINC01558Q9Y6Z2 57 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 GOLGA4Q13439 2230 aaKnown RBP0.27□□□□□ -2.37
VCL-203ENST00000461383 WDR7Q9Y4E6 1490 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 LRP6O75581 1613 aa0.27□□□□□ -2.37
VCL-203ENST00000461383 USF3Q68DE3 2245 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 PTPRQQ9UMZ3 2332 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 LINC00587B1AMM8 73 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 BCE1O60756 84 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 SFT2D2O95562 160 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 DCDP81605 110 aaKnown RBP0.26□□□□□ -2.37
VCL-203ENST00000461383 MANBALQ9NQG1 85 aa0.26□□□□□ -2.37
VCL-203ENST00000461383 RIMS1Q86UR5 1692 aaKnown RBP0.26□□□□□ -2.37
VCL-203ENST00000461383 AKAP6Q13023 2319 aa0.25□□□□□ -2.37
VCL-203ENST00000461383 KDM5AP29375 1690 aaKnown RBP0.25□□□□□ -2.37
VCL-203ENST00000461383 BIVM-ERCC5R4GMW8 1640 aa0.25□□□□□ -2.37
VCL-203ENST00000461383 GTF2H5Q6ZYL4 71 aa0.25□□□□□ -2.37
VCL-203ENST00000461383 Q8IZM0 81 aa0.25□□□□□ -2.37
VCL-203ENST00000461383 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
VCL-203ENST00000461383 SHROOM2Q13796 1616 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 NRKQ7Z2Y5 1582 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 FXYD6-FXYD2A0A087WZ82 144 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 MGPP08493 103 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 WHAMMP3Q1A5X7 153 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 NXT2Q9NPJ8 142 aaKnown RBP0.24□□□□□ -2.37
VCL-203ENST00000461383 TET3O43151 1660 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 NHSL1Q5SYE7 1610 aa0.24□□□□□ -2.37
VCL-203ENST00000461383 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 SHANK2Q9UPX8 1470 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 C10orf71Q711Q0 1435 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 SCAPERQ9BY12 1400 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 NAP1L6A6NFF2 107 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 LINC00472Q9H8W2 130 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 TP53AIP1Q9HCN2 124 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 ARL2-SNX15V9GYD0 113 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 MYOM1P52179 1685 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 RAPGEF6Q8TEU7 1601 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 CHD9Q3L8U1 2897 aa0.23□□□□□ -2.37
VCL-203ENST00000461383 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
VCL-203ENST00000461383 ZNF292O60281 2723 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 C20orf202A1L168 122 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 TRAPPC2P0DI81 140 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 TRAPPC2BP0DI82 140 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 SNCAP37840 140 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 UBA52P62987 128 aaKnown RBP0.22□□□□□ -2.37
VCL-203ENST00000461383 WFDC2Q14508 124 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 PIGYQ3MUY2 71 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 FAM135AQ9P2D6 1515 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 PZPP20742 1482 aa0.22□□□□□ -2.37
VCL-203ENST00000461383 UBR5O95071 2799 aaPredicted RBP0.22□□□□□ -2.37
VCL-203ENST00000461383 SPTBN1Q01082 2364 aaKnown RBP0.21□□□□□ -2.38
VCL-203ENST00000461383 IGLC1P0CG04 106 aa0.21□□□□□ -2.38
VCL-203ENST00000461383 Q0VG73 95 aa0.21□□□□□ -2.38
VCL-203ENST00000461383 FAM167A-AS1Q96KT0 104 aa0.21□□□□□ -2.38
VCL-203ENST00000461383 CDC42SE2Q9NRR3 84 aa0.21□□□□□ -2.38
VCL-203ENST00000461383 COX6CP09669 75 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 KRTDAPP60985 99 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 DEFB109BQ30KR1 87 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 SFTA2Q6UW10 78 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 PRO1854Q9UHT4 67 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 NCOR1O75376 2440 aa0.2□□□□□ -2.38
VCL-203ENST00000461383 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
VCL-203ENST00000461383 PDCD11Q14690 1871 aaKnown RBP0.19□□□□□ -2.38
VCL-203ENST00000461383 TRBV6-1A0A0K0K1D8 114 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms