RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FGF6P10767 208 aa8.78□□□□□ -1
RAB11FIP3-207ENST00000461009 KRTAP10-1P60331 282 aa8.78□□□□□ -1
RAB11FIP3-207ENST00000461009 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
RAB11FIP3-207ENST00000461009 HSPG2P98160 4391 aa8.78□□□□□ -1
RAB11FIP3-207ENST00000461009 HLA-DQA1P01909 254 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 RAB5AP20339 215 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 DGAT2L7PQ6IED9 249 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 GNB1LQ9BYB4 327 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 MAP1LC3AQ9H492 121 aa8.77□□□□□ -1.01
RAB11FIP3-207ENST00000461009 PRSS47A8MTI9 375 aa8.76□□□□□ -1.01
RAB11FIP3-207ENST00000461009 XGP55808 180 aa8.76□□□□□ -1.01
RAB11FIP3-207ENST00000461009 MRPL52Q86TS9 123 aaKnown RBP8.76□□□□□ -1.01
RAB11FIP3-207ENST00000461009 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
RAB11FIP3-207ENST00000461009 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
RAB11FIP3-207ENST00000461009 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
RAB11FIP3-207ENST00000461009 MT-ND6P03923 174 aa8.74□□□□□ -1.01
RAB11FIP3-207ENST00000461009 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
RAB11FIP3-207ENST00000461009 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 IGKV3OR2-268A0A0C4DH90 116 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 LOC389332A0A1B0GUA5 103 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 ZNF664Q8N3J9 261 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 Q8N8P6 123 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
RAB11FIP3-207ENST00000461009 K7EMI3 77 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 LECT2O14960 151 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 INAFM2P0DMQ5 153 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 Q5VSD8 79 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 NXT2Q9NPJ8 142 aaKnown RBP8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 CDC42SE2Q9NRR3 84 aa8.72□□□□□ -1.01
RAB11FIP3-207ENST00000461009 G0S2P27469 103 aa8.71□□□□□ -1.02
RAB11FIP3-207ENST00000461009 FABP9Q0Z7S8 132 aa8.71□□□□□ -1.02
RAB11FIP3-207ENST00000461009 SS18Q15532 418 aa8.71□□□□□ -1.02
RAB11FIP3-207ENST00000461009 MRPL18Q9H0U6 180 aaKnown RBP8.71□□□□□ -1.02
RAB11FIP3-207ENST00000461009 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
RAB11FIP3-207ENST00000461009 ABCA13Q86UQ4 5058 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 CCL25O15444 150 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 WFDC2Q14508 124 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 SPANXA1Q9NS26 97 aa8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
RAB11FIP3-207ENST00000461009 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 TGIF2-C20orf24A0A0A6YYL0 155 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 GAGE12HA6NDE8 117 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 USP17L23D6RBM5 183 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 RPL39P62891 51 aaKnown RBP8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 TRAPPC1Q9Y5R8 145 aa8.69□□□□□ -1.02
RAB11FIP3-207ENST00000461009 LINC00959A0A1B0GUT2 108 aa8.68□□□□□ -1.02
RAB11FIP3-207ENST00000461009 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
RAB11FIP3-207ENST00000461009 IFI27P40305 119 aaPredicted RBP8.68□□□□□ -1.02
RAB11FIP3-207ENST00000461009 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
RAB11FIP3-207ENST00000461009 SMCO4Q9NRQ5 59 aa8.68□□□□□ -1.02
RAB11FIP3-207ENST00000461009 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
RAB11FIP3-207ENST00000461009 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
RAB11FIP3-207ENST00000461009 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
RAB11FIP3-207ENST00000461009 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
RAB11FIP3-207ENST00000461009 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 XCL1P47992 114 aa8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 HAMPP81172 84 aa8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 Q6ZUT4 128 aa8.65□□□□□ -1.02
RAB11FIP3-207ENST00000461009 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 LINC01549A6NIU2 74 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 PRSS1P07477 247 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
RAB11FIP3-207ENST00000461009 NPSP0C0P6 89 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 FOXI1Q12951 378 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 Q6ZN92 141 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 YPEL4Q96NS1 127 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
RAB11FIP3-207ENST00000461009 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
RAB11FIP3-207ENST00000461009 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 IFITM10A6NMD0 228 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 MALP21145 153 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 Q6ZSA8 131 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 CBLN2Q8IUK8 224 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 C2orf88Q9BSF0 95 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 VCX2Q9H322 139 aa8.61□□□□□ -1.03
RAB11FIP3-207ENST00000461009 COX7A2LO14548 114 aa8.6□□□□□ -1.03
RAB11FIP3-207ENST00000461009 RAB5BP61020 215 aa8.6□□□□□ -1.03
RAB11FIP3-207ENST00000461009 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms