RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 CDC42SE2Q9NRR3 84 aa13.55□□□□□ -0.24
RPUSD3-210ENST00000460909 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
RPUSD3-210ENST00000460909 HLA-DQA1P01909 254 aa13.54□□□□□ -0.24
RPUSD3-210ENST00000460909 OR5A1Q8NGJ0 315 aa13.54□□□□□ -0.24
RPUSD3-210ENST00000460909 TMEM101Q96IK0 257 aa13.54□□□□□ -0.24
RPUSD3-210ENST00000460909 CSDC2Q9Y534 153 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-210ENST00000460909 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
RPUSD3-210ENST00000460909 IGKV3OR2-268A0A0C4DH90 116 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 LOC389332A0A1B0GUA5 103 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 KIAA1644Q3SXP7 199 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 COX19Q49B96 90 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 ZNF664Q8N3J9 261 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 TIMM21Q9BVV7 248 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 HSPG2P98160 4391 aa13.52□□□□□ -0.25
RPUSD3-210ENST00000460909 IGLV5-52A0A0A0MRZ9 124 aa13.51□□□□□ -0.25
RPUSD3-210ENST00000460909 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
RPUSD3-210ENST00000460909 Q8N8P6 123 aa13.51□□□□□ -0.25
RPUSD3-210ENST00000460909 TGIF2-C20orf24A0A0A6YYL0 155 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 USP17L23D6RBM5 183 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 KRTAP10-1P60331 282 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 TMEM18Q96B42 140 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 HERC2O95714 4834 aa13.5□□□□□ -0.25
RPUSD3-210ENST00000460909 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 MT-ND6P03923 174 aa13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 RAB5AP20339 215 aa13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 GCSHP23434 173 aa13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 CHCHD10Q8WYQ3 142 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-210ENST00000460909 LINC00959A0A1B0GUT2 108 aa13.48□□□□□ -0.25
RPUSD3-210ENST00000460909 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
RPUSD3-210ENST00000460909 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
RPUSD3-210ENST00000460909 GAGE12HA6NDE8 117 aa13.47□□□□□ -0.25
RPUSD3-210ENST00000460909 C14orf177Q52M58 125 aa13.47□□□□□ -0.25
RPUSD3-210ENST00000460909 ALKBH7Q9BT30 221 aaPredicted RBP13.47□□□□□ -0.25
RPUSD3-210ENST00000460909 MRPL18Q9H0U6 180 aaKnown RBP13.47□□□□□ -0.25
RPUSD3-210ENST00000460909 PRSS1P07477 247 aa13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 IFI27P40305 119 aaPredicted RBP13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 Q6ZUT4 128 aa13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 NXT2Q9NPJ8 142 aaKnown RBP13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 DNAH8Q96JB1 4490 aa13.46□□□□□ -0.25
RPUSD3-210ENST00000460909 RYR1P21817 5038 aa13.45□□□□□ -0.26
RPUSD3-210ENST00000460909 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
RPUSD3-210ENST00000460909 K7EMI3 77 aa13.44□□□□□ -0.26
RPUSD3-210ENST00000460909 FABP9Q0Z7S8 132 aa13.44□□□□□ -0.26
RPUSD3-210ENST00000460909 FOXI1Q12951 378 aa13.44□□□□□ -0.26
RPUSD3-210ENST00000460909 OPRPNQ99935 248 aaPredicted RBP13.44□□□□□ -0.26
RPUSD3-210ENST00000460909 CCL25O15444 150 aa13.43□□□□□ -0.26
RPUSD3-210ENST00000460909 MRPS36P82909 103 aaKnown RBP13.43□□□□□ -0.26
RPUSD3-210ENST00000460909 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
RPUSD3-210ENST00000460909 XCL1P47992 114 aa13.42□□□□□ -0.26
RPUSD3-210ENST00000460909 SS18Q15532 418 aa13.42□□□□□ -0.26
RPUSD3-210ENST00000460909 ORMDL2Q53FV1 153 aa13.42□□□□□ -0.26
RPUSD3-210ENST00000460909 C15orf56Q8N910 161 aa13.41□□□□□ -0.26
RPUSD3-210ENST00000460909 TRAPPC1Q9Y5R8 145 aa13.41□□□□□ -0.26
RPUSD3-210ENST00000460909 LINC01546A6NGU7 62 aa13.4□□□□□ -0.26
RPUSD3-210ENST00000460909 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.26
RPUSD3-210ENST00000460909 LINC01620Q4KN68 170 aa13.4□□□□□ -0.26
RPUSD3-210ENST00000460909 CD164L2Q6UWJ8 174 aa13.4□□□□□ -0.26
RPUSD3-210ENST00000460909 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
RPUSD3-210ENST00000460909 XGP55808 180 aa13.39□□□□□ -0.27
RPUSD3-210ENST00000460909 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
RPUSD3-210ENST00000460909 KRTAP17-1Q9BYP8 105 aa13.39□□□□□ -0.27
RPUSD3-210ENST00000460909 CYSLTR1Q9Y271 337 aa13.39□□□□□ -0.27
RPUSD3-210ENST00000460909 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
RPUSD3-210ENST00000460909 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
RPUSD3-210ENST00000460909 PRSS3P2Q8NHM4 247 aa13.38□□□□□ -0.27
RPUSD3-210ENST00000460909 SMCO4Q9NRQ5 59 aa13.38□□□□□ -0.27
RPUSD3-210ENST00000460909 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
RPUSD3-210ENST00000460909 SLPIP03973 132 aa13.37□□□□□ -0.27
RPUSD3-210ENST00000460909 FAM30AQ9NZY2 134 aa13.37□□□□□ -0.27
RPUSD3-210ENST00000460909 IGIPA6NJ69 53 aa13.36□□□□□ -0.27
RPUSD3-210ENST00000460909 CNBPP62633 177 aaKnown RBP13.36□□□□□ -0.27
RPUSD3-210ENST00000460909 CFAP161Q6P656 301 aa13.36□□□□□ -0.27
RPUSD3-210ENST00000460909 Q6ZSA8 131 aa13.35□□□□□ -0.27
RPUSD3-210ENST00000460909 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
RPUSD3-210ENST00000460909 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
RPUSD3-210ENST00000460909 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
RPUSD3-210ENST00000460909 TOMM6Q96B49 74 aa13.34□□□□□ -0.27
RPUSD3-210ENST00000460909 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
RPUSD3-210ENST00000460909 IFITM10A6NMD0 228 aa13.33□□□□□ -0.28
RPUSD3-210ENST00000460909 NPSP0C0P6 89 aa13.33□□□□□ -0.28
RPUSD3-210ENST00000460909 G0S2P27469 103 aa13.33□□□□□ -0.28
RPUSD3-210ENST00000460909 LINC00173Q6ZV60 143 aa13.33□□□□□ -0.28
RPUSD3-210ENST00000460909 HIGD2BQ4VC39 106 aa13.32□□□□□ -0.28
RPUSD3-210ENST00000460909 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
RPUSD3-210ENST00000460909 AMELXQ99217 191 aa13.32□□□□□ -0.28
RPUSD3-210ENST00000460909 IGHV3OR16-9A0A0B4J2B5 98 aa13.31□□□□□ -0.28
RPUSD3-210ENST00000460909 IGHV1-58A0A0C4DH39 117 aa13.31□□□□□ -0.28
RPUSD3-210ENST00000460909 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
RPUSD3-210ENST00000460909 FAT1Q14517 4588 aa13.3□□□□□ -0.28
RPUSD3-210ENST00000460909 COX7A2LO14548 114 aa13.3□□□□□ -0.28
RPUSD3-210ENST00000460909 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
RPUSD3-210ENST00000460909 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
RPUSD3-210ENST00000460909 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
RPUSD3-210ENST00000460909 HAMPP81172 84 aa13.29□□□□□ -0.28
RPUSD3-210ENST00000460909 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
RPUSD3-210ENST00000460909 ERASQ7Z444 233 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms