RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TTTY13Q9BZ97 58 aa1.67□□□□□ -2.14
HPS3-203ENST00000460822 NDUFA4L2Q9NRX3 87 aa1.67□□□□□ -2.14
HPS3-203ENST00000460822 NHP2Q9NX24 153 aaKnown RBP1.67□□□□□ -2.14
HPS3-203ENST00000460822 LINC00312Q9Y6C7 94 aa1.67□□□□□ -2.14
HPS3-203ENST00000460822 U3KQA8 63 aa1.67□□□□□ -2.14
HPS3-203ENST00000460822 MALRD1Q5VYJ5 2156 aa1.67□□□□□ -2.14
HPS3-203ENST00000460822 CADP27708 2225 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 WDFY4Q6ZS81 3184 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 URB1O60287 2271 aaKnown RBP1.66□□□□□ -2.14
HPS3-203ENST00000460822 ICE1Q9Y2F5 2266 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 PLCE1Q9P212 2302 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 TNRC18O15417 2968 aaPredicted RBP1.66□□□□□ -2.14
HPS3-203ENST00000460822 DMXL2Q8TDJ6 3036 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 TRBV25-1A0A075B6N4 114 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 TRAV4A0A0B4J268 109 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 A0A1B0GU33 70 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 E7EUB6 86 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 K7EMI3 77 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 SPINK8P0C7L1 97 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 HLA-DRB4P13762 266 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 TMEM78Q5T7P6 136 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 Q6AWC8 147 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 Q6ZUT4 128 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 EXOC3-AS1Q8N2X6 119 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 C1orf64Q8NEQ6 169 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 ATP6V0E2Q8NHE4 81 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 PRELID3AQ96N28 172 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 MRPL36Q9P0J6 103 aaKnown RBP1.66□□□□□ -2.14
HPS3-203ENST00000460822 ERG28Q9UKR5 140 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 HHLA3Q9XRX5 114 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 HLA-DRB4X5D2U9 266 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 AHCTF1Q8WYP5 2266 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 LOC400499M0QZD8 3231 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
HPS3-203ENST00000460822 TRBV19A0A075B6N1 114 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 TRBV6-1A0A0K0K1D8 114 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 LINC01546A6NGU7 62 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 LEPROTO15243 131 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 IGKCP01834 107 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 ZNF22P17026 224 aaPredicted RBP1.65□□□□□ -2.14
HPS3-203ENST00000460822 EVI2AP22794 236 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 KRTAP10-1P60331 282 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 ERHP84090 104 aaKnown RBP1.65□□□□□ -2.14
HPS3-203ENST00000460822 WT1-ASQ06250 92 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 RRN3P1Q2M238 152 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 PSMG4Q5JS54 123 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 CFAP126Q5VTH2 177 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 Q6ZS92 163 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 OTORQ9NRC9 128 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 R4GN34 69 aa1.65□□□□□ -2.14
HPS3-203ENST00000460822 ARHGAP32A7KAX9 2087 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 ZGRF1Q86YA3 2104 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 TACC2O95359 2948 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 CSMD1Q96PZ7 3565 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 TRBV7-3A0A075B6L6 115 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 LYZL6O75951 148 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 NPYP01303 97 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 RBP4P02753 201 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 CCL4P13236 92 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 CRIP1P50238 77 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 ZNF80P51504 273 aaPredicted RBP1.65□□□□□ -2.15
HPS3-203ENST00000460822 KRTAP13-2Q52LG2 175 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 LYZL1Q6UWQ5 148 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 TMEM167AQ8TBQ9 72 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 SMCR5Q8TEV8 140 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 TRGV9Q99603 122 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 TTTY12Q9BZ98 90 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 XAGE1AQ9HD64 81 aa1.65□□□□□ -2.15
HPS3-203ENST00000460822 CUL9Q8IWT3 2517 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 TRAV41A0A0B4J266 112 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 DPM2O94777 84 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 PRB4P10163 310 aaPredicted RBP1.64□□□□□ -2.15
HPS3-203ENST00000460822 HLA-DMBP28068 263 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 FCER1GP30273 86 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 CKS2P33552 79 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 ZNF833PQ6ZTB9 187 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 PPDPFLQ8WWR9 84 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 CARD19Q96LW7 228 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 MRPL35Q9NZE8 188 aaKnown RBP1.64□□□□□ -2.15
HPS3-203ENST00000460822 TMEM14CQ9P0S9 112 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 HIGD1AQ9Y241 93 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 MGAQ8IWI9 3026 aa1.64□□□□□ -2.15
HPS3-203ENST00000460822 TMSB15BA0A087X1C1 80 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 H3BRN7 92 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 BUB1B-PAK6H3BSN5 160 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 M0R3E3 92 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 PRB2P02812 416 aaPredicted RBP1.63□□□□□ -2.15
HPS3-203ENST00000460822 IGLC6P0CF74 106 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 XCL1P47992 114 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 UBE2D3P61077 147 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 UBE2D2P62837 147 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 DIAPH2-AS1Q14236 149 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 MIAQ16674 131 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 HCP5Q6MZN7 132 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 IGFL3Q6UXB1 125 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 LCA10Q71F78 164 aa1.63□□□□□ -2.15
HPS3-203ENST00000460822 TEN1Q86WV5 123 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms