RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 SERF1AO75920 110 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 NDUFA6P56556 154 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 MIAQ16674 131 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
HDAC4-206ENST00000460235 VCX2Q9H322 139 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 KLK12Q9UKR0 248 aa8.4□□□□□ -1.06
HDAC4-206ENST00000460235 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
HDAC4-206ENST00000460235 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
HDAC4-206ENST00000460235 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
HDAC4-206ENST00000460235 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
HDAC4-206ENST00000460235 SEC11AP67812 179 aa8.38□□□□□ -1.07
HDAC4-206ENST00000460235 REG3AQ06141 175 aa8.38□□□□□ -1.07
HDAC4-206ENST00000460235 SS18Q15532 418 aa8.38□□□□□ -1.07
HDAC4-206ENST00000460235 Q8N976 141 aa8.38□□□□□ -1.07
HDAC4-206ENST00000460235 UBE2WQ96B02 151 aa8.38□□□□□ -1.07
HDAC4-206ENST00000460235 LEPROTL1O95214 131 aa8.37□□□□□ -1.07
HDAC4-206ENST00000460235 S100A2P29034 98 aa8.37□□□□□ -1.07
HDAC4-206ENST00000460235 LINC00269Q8N2A0 174 aa8.37□□□□□ -1.07
HDAC4-206ENST00000460235 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
HDAC4-206ENST00000460235 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
HDAC4-206ENST00000460235 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
HDAC4-206ENST00000460235 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
HDAC4-206ENST00000460235 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
HDAC4-206ENST00000460235 PRSS1P07477 247 aa8.35□□□□□ -1.07
HDAC4-206ENST00000460235 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
HDAC4-206ENST00000460235 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
HDAC4-206ENST00000460235 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
HDAC4-206ENST00000460235 IGLV4-3A0A075B6K6 122 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 M0R2N4 97 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 PSCAO43653 123 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 AKR1D1P51857 326 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 PMVKQ15126 192 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 Q6ZR54 194 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 C6orf223Q8N319 242 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
HDAC4-206ENST00000460235 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
HDAC4-206ENST00000460235 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
HDAC4-206ENST00000460235 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
HDAC4-206ENST00000460235 Q6ZUT4 128 aa8.33□□□□□ -1.08
HDAC4-206ENST00000460235 Q9HAA7 133 aa8.33□□□□□ -1.08
HDAC4-206ENST00000460235 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 ENHOQ6UWT2 76 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 AMELXQ99217 191 aa8.32□□□□□ -1.08
HDAC4-206ENST00000460235 GEMIN7Q9H840 131 aaKnown RBP8.32□□□□□ -1.08
HDAC4-206ENST00000460235 A0A096LNJ9 63 aa8.31□□□□□ -1.08
HDAC4-206ENST00000460235 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
HDAC4-206ENST00000460235 EREGO14944 169 aa8.31□□□□□ -1.08
HDAC4-206ENST00000460235 FABP4P15090 132 aa8.31□□□□□ -1.08
HDAC4-206ENST00000460235 LINC00310P59036 64 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 HERVK_113P63121 156 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 CLPSL2Q6UWE3 100 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 Q8N3U1 123 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 CHCHD10Q8WYQ3 142 aaPredicted RBP8.3□□□□□ -1.08
HDAC4-206ENST00000460235 CST9LQ9H4G1 147 aa8.3□□□□□ -1.08
HDAC4-206ENST00000460235 C20orf202A1L168 122 aa8.29□□□□□ -1.08
HDAC4-206ENST00000460235 NUPR1O60356 82 aa8.29□□□□□ -1.08
HDAC4-206ENST00000460235 APOMO95445 188 aa8.29□□□□□ -1.08
HDAC4-206ENST00000460235 C14orf177Q52M58 125 aa8.29□□□□□ -1.08
HDAC4-206ENST00000460235 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
HDAC4-206ENST00000460235 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
HDAC4-206ENST00000460235 H3BRM9 83 aa8.28□□□□□ -1.08
HDAC4-206ENST00000460235 MALP21145 153 aa8.28□□□□□ -1.08
HDAC4-206ENST00000460235 UBE2D1P51668 147 aa8.28□□□□□ -1.08
HDAC4-206ENST00000460235 SNRPEP62304 92 aaKnown RBP8.28□□□□□ -1.08
HDAC4-206ENST00000460235 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
HDAC4-206ENST00000460235 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
HDAC4-206ENST00000460235 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 TINCRA0A1B0GVN0 87 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 COX7A2LO14548 114 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 XCL1P47992 114 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 PET117Q6UWS5 81 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 SPATA12Q7Z6I5 190 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 KRTAP1-5Q9BYS1 174 aa8.27□□□□□ -1.09
HDAC4-206ENST00000460235 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
HDAC4-206ENST00000460235 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
HDAC4-206ENST00000460235 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
HDAC4-206ENST00000460235 C5orf52A6NGY3 159 aa8.26□□□□□ -1.09
HDAC4-206ENST00000460235 PLNP26678 52 aa8.26□□□□□ -1.09
HDAC4-206ENST00000460235 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
HDAC4-206ENST00000460235 F8VRH5 84 aa8.25□□□□□ -1.09
HDAC4-206ENST00000460235 SYS1-DBNDD2H3BUS1 97 aa8.25□□□□□ -1.09
HDAC4-206ENST00000460235 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
HDAC4-206ENST00000460235 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
HDAC4-206ENST00000460235 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
HDAC4-206ENST00000460235 TMA7Q9Y2S6 64 aaKnown RBP8.25□□□□□ -1.09
HDAC4-206ENST00000460235 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
HDAC4-206ENST00000460235 H0Y8G0 127 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms