RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 K7EMI3 77 aa17.13■□□□□ 0.33
SEMA3C-205ENST00000458729 YPEL4Q96NS1 127 aa17.13■□□□□ 0.33
SEMA3C-205ENST00000458729 ALKBH7Q9BT30 221 aaPredicted RBP17.13■□□□□ 0.33
SEMA3C-205ENST00000458729 UBE2D4Q9Y2X8 147 aa17.13■□□□□ 0.33
SEMA3C-205ENST00000458729 TRAPPC1Q9Y5R8 145 aa17.13■□□□□ 0.33
SEMA3C-205ENST00000458729 CDC42SE2Q9NRR3 84 aa17.12■□□□□ 0.33
SEMA3C-205ENST00000458729 PGPEP1Q9NXJ5 209 aa17.12■□□□□ 0.33
SEMA3C-205ENST00000458729 ZNF664Q8N3J9 261 aa17.11■□□□□ 0.33
SEMA3C-205ENST00000458729 BAALCQ8WXS3 180 aa17.11■□□□□ 0.33
SEMA3C-205ENST00000458729 ORMDL2Q53FV1 153 aa17.1■□□□□ 0.33
SEMA3C-205ENST00000458729 CBLN2Q8IUK8 224 aa17.1■□□□□ 0.33
SEMA3C-205ENST00000458729 IGLV10-54A0A075B6I4 117 aa17.09■□□□□ 0.33
SEMA3C-205ENST00000458729 IGKV3OR2-268A0A0C4DH90 116 aa17.09■□□□□ 0.33
SEMA3C-205ENST00000458729 IFI27P40305 119 aaPredicted RBP17.09■□□□□ 0.33
SEMA3C-205ENST00000458729 KRTAP10-2P60368 255 aa17.09■□□□□ 0.33
SEMA3C-205ENST00000458729 RPL39P62891 51 aaKnown RBP17.09■□□□□ 0.33
SEMA3C-205ENST00000458729 KRTAP26-1Q6PEX3 210 aa17.08■□□□□ 0.32
SEMA3C-205ENST00000458729 Q8N814 137 aa17.08■□□□□ 0.32
SEMA3C-205ENST00000458729 SPANXA1Q9NS26 97 aa17.08■□□□□ 0.32
SEMA3C-205ENST00000458729 DNAH11Q96DT5 4516 aa17.08■□□□□ 0.32
SEMA3C-205ENST00000458729 CDPF1Q6NVV7 123 aa17.07■□□□□ 0.32
SEMA3C-205ENST00000458729 PRSS3P2Q8NHM4 247 aa17.07■□□□□ 0.32
SEMA3C-205ENST00000458729 WFDC2Q14508 124 aa17.06■□□□□ 0.32
SEMA3C-205ENST00000458729 BIRC6Q9NR09 4857 aa17.05■□□□□ 0.32
SEMA3C-205ENST00000458729 C16orf90A8MZG2 172 aa17.05■□□□□ 0.32
SEMA3C-205ENST00000458729 LECT2O14960 151 aa17.05■□□□□ 0.32
SEMA3C-205ENST00000458729 NTN5Q8WTR8 489 aaPredicted RBP17.05■□□□□ 0.32
SEMA3C-205ENST00000458729 G0S2P27469 103 aa17.04■□□□□ 0.32
SEMA3C-205ENST00000458729 LINC00959A0A1B0GUT2 108 aa17.03■□□□□ 0.32
SEMA3C-205ENST00000458729 C14orf177Q52M58 125 aa17.03■□□□□ 0.32
SEMA3C-205ENST00000458729 CHCHD10Q8WYQ3 142 aaPredicted RBP17.03■□□□□ 0.32
SEMA3C-205ENST00000458729 CYSLTR1Q9Y271 337 aa17.03■□□□□ 0.32
SEMA3C-205ENST00000458729 PYGO1Q9Y3Y4 419 aa17.03■□□□□ 0.32
SEMA3C-205ENST00000458729 MRPS36P82909 103 aaKnown RBP17.02■□□□□ 0.32
SEMA3C-205ENST00000458729 SS18Q15532 418 aa17.02■□□□□ 0.32
SEMA3C-205ENST00000458729 CCL25O15444 150 aa17.01■□□□□ 0.31
SEMA3C-205ENST00000458729 C2orf66Q6UXQ4 117 aa17.01■□□□□ 0.31
SEMA3C-205ENST00000458729 Q6ZUT4 128 aa17.01■□□□□ 0.31
SEMA3C-205ENST00000458729 GAGE12HA6NDE8 117 aa17■□□□□ 0.31
SEMA3C-205ENST00000458729 LINC01546A6NGU7 62 aa16.99■□□□□ 0.31
SEMA3C-205ENST00000458729 USP17L23D6RBM5 183 aa16.99■□□□□ 0.31
SEMA3C-205ENST00000458729 RNASE13Q5GAN3 156 aaKnown RBP16.98■□□□□ 0.31
SEMA3C-205ENST00000458729 FA2HQ7L5A8 372 aa16.98■□□□□ 0.31
SEMA3C-205ENST00000458729 IGLV5-52A0A0A0MRZ9 124 aa16.97■□□□□ 0.31
SEMA3C-205ENST00000458729 C1orf196B1AJZ1 125 aa16.97■□□□□ 0.31
SEMA3C-205ENST00000458729 FAM104AQ969W3 186 aa16.97■□□□□ 0.31
SEMA3C-205ENST00000458729 PKHD1P08F94 4074 aa16.97■□□□□ 0.31
SEMA3C-205ENST00000458729 FUSP35637 526 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEMA3C-205ENST00000458729 C18orf32Q8TCD1 76 aa16.96■□□□□ 0.31
SEMA3C-205ENST00000458729 OPRPNQ99935 248 aaPredicted RBP16.96■□□□□ 0.31
SEMA3C-205ENST00000458729 NPSP0C0P6 89 aa16.96■□□□□ 0.3
SEMA3C-205ENST00000458729 XCL1P47992 114 aa16.96■□□□□ 0.3
SEMA3C-205ENST00000458729 DYNC1H1Q14204 4646 aaKnown RBP16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 TRAV13-1A0A0B4J241 112 aa16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 LINC01549A6NIU2 74 aa16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 CFAP161Q6P656 301 aa16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 CD164L2Q6UWJ8 174 aa16.95■□□□□ 0.3
SEMA3C-205ENST00000458729 IGLV4-3A0A075B6K6 122 aa16.94■□□□□ 0.3
SEMA3C-205ENST00000458729 FOXI1Q12951 378 aa16.94■□□□□ 0.3
SEMA3C-205ENST00000458729 TOMM6Q96B49 74 aa16.94■□□□□ 0.3
SEMA3C-205ENST00000458729 TMEM141Q96I45 108 aa16.94■□□□□ 0.3
SEMA3C-205ENST00000458729 COLCA2A8K830 154 aa16.92■□□□□ 0.3
SEMA3C-205ENST00000458729 GCSHP23434 173 aa16.92■□□□□ 0.3
SEMA3C-205ENST00000458729 RAB5BP61020 215 aa16.92■□□□□ 0.3
SEMA3C-205ENST00000458729 AP5S1Q9NUS5 200 aa16.92■□□□□ 0.3
SEMA3C-205ENST00000458729 IGIPA6NJ69 53 aa16.91■□□□□ 0.3
SEMA3C-205ENST00000458729 IFITM10A6NMD0 228 aa16.91■□□□□ 0.3
SEMA3C-205ENST00000458729 LINC00614P0C842 121 aa16.91■□□□□ 0.3
SEMA3C-205ENST00000458729 PAPPA-AS1Q5QFB9 102 aa16.91■□□□□ 0.3
SEMA3C-205ENST00000458729 Q6ZN92 141 aa16.91■□□□□ 0.3
SEMA3C-205ENST00000458729 PRSS1P07477 247 aa16.9■□□□□ 0.3
SEMA3C-205ENST00000458729 TEX43Q6ZNM6 134 aa16.9■□□□□ 0.3
SEMA3C-205ENST00000458729 TIMM17AQ99595 171 aa16.9■□□□□ 0.3
SEMA3C-205ENST00000458729 VCX2Q9H322 139 aa16.89■□□□□ 0.29
SEMA3C-205ENST00000458729 DNAH5Q8TE73 4624 aa16.88■□□□□ 0.29
SEMA3C-205ENST00000458729 TRGC2P03986 189 aa16.88■□□□□ 0.29
SEMA3C-205ENST00000458729 ERASQ7Z444 233 aa16.88■□□□□ 0.29
SEMA3C-205ENST00000458729 SCGB3A1Q96QR1 104 aa16.88■□□□□ 0.29
SEMA3C-205ENST00000458729 C2orf88Q9BSF0 95 aa16.88■□□□□ 0.29
SEMA3C-205ENST00000458729 hDV102S1A0JD36 115 aa16.87■□□□□ 0.29
SEMA3C-205ENST00000458729 URB1-AS1Q96HZ7 61 aa16.87■□□□□ 0.29
SEMA3C-205ENST00000458729 SCO1O75880 301 aa16.86■□□□□ 0.29
SEMA3C-205ENST00000458729 C15orf56Q8N910 161 aa16.86■□□□□ 0.29
SEMA3C-205ENST00000458729 AMELXQ99217 191 aa16.86■□□□□ 0.29
SEMA3C-205ENST00000458729 IGHV1-58A0A0C4DH39 117 aa16.84■□□□□ 0.29
SEMA3C-205ENST00000458729 COX7A2LO14548 114 aa16.84■□□□□ 0.29
SEMA3C-205ENST00000458729 KRTAP10-1P60331 282 aa16.84■□□□□ 0.29
SEMA3C-205ENST00000458729 LRP1BQ9NZR2 4599 aa16.83■□□□□ 0.28
SEMA3C-205ENST00000458729 MALP21145 153 aa16.82■□□□□ 0.28
SEMA3C-205ENST00000458729 LINC00173Q6ZV60 143 aa16.82■□□□□ 0.28
SEMA3C-205ENST00000458729 GVQW2A0A096LPI5 108 aaPredicted RBP16.81■□□□□ 0.28
SEMA3C-205ENST00000458729 CDK2AP2O75956 126 aa16.81■□□□□ 0.28
SEMA3C-205ENST00000458729 UBE2D1P51668 147 aa16.81■□□□□ 0.28
SEMA3C-205ENST00000458729 CHCHD1Q96BP2 118 aaKnown RBP16.81■□□□□ 0.28
SEMA3C-205ENST00000458729 HBDP02042 147 aa16.8■□□□□ 0.28
SEMA3C-205ENST00000458729 S100A1P23297 94 aa16.8■□□□□ 0.28
SEMA3C-205ENST00000458729 CNBPP62633 177 aaKnown RBP16.8■□□□□ 0.28
SEMA3C-205ENST00000458729 C5orf38Q86SI9 138 aa16.8■□□□□ 0.28
SEMA3C-205ENST00000458729 IGHV3OR16-9A0A0B4J2B5 98 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms