RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DNAH11Q96DT5 4516 aa10.62□□□□□ -0.71
CD28-203ENST00000458610 IGKV3OR2-268A0A0C4DH90 116 aa10.61□□□□□ -0.71
CD28-203ENST00000458610 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
CD28-203ENST00000458610 RHEBQ15382 184 aa10.61□□□□□ -0.71
CD28-203ENST00000458610 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
CD28-203ENST00000458610 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
CD28-203ENST00000458610 COX19Q49B96 90 aa10.6□□□□□ -0.71
CD28-203ENST00000458610 SVBPQ8N300 66 aa10.6□□□□□ -0.71
CD28-203ENST00000458610 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
CD28-203ENST00000458610 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
CD28-203ENST00000458610 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
CD28-203ENST00000458610 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
CD28-203ENST00000458610 CCL25O15444 150 aa10.59□□□□□ -0.71
CD28-203ENST00000458610 SS18Q15532 418 aa10.59□□□□□ -0.71
CD28-203ENST00000458610 MAP1LC3AQ9H492 121 aa10.59□□□□□ -0.71
CD28-203ENST00000458610 RPS10P5Q9NQ39 176 aa10.59□□□□□ -0.71
CD28-203ENST00000458610 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
CD28-203ENST00000458610 SNAPINO95295 136 aa10.58□□□□□ -0.72
CD28-203ENST00000458610 CHCHD10Q8WYQ3 142 aaPredicted RBP10.58□□□□□ -0.72
CD28-203ENST00000458610 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
CD28-203ENST00000458610 APOC3P02656 99 aa10.57□□□□□ -0.72
CD28-203ENST00000458610 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
CD28-203ENST00000458610 DYNC1H1Q14204 4646 aaKnown RBP10.57□□□□□ -0.72
CD28-203ENST00000458610 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
CD28-203ENST00000458610 K7EMI3 77 aa10.56□□□□□ -0.72
CD28-203ENST00000458610 PRSS1P07477 247 aa10.56□□□□□ -0.72
CD28-203ENST00000458610 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
CD28-203ENST00000458610 PKHD1P08F94 4074 aa10.56□□□□□ -0.72
CD28-203ENST00000458610 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
CD28-203ENST00000458610 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
CD28-203ENST00000458610 Q8N8P6 123 aa10.55□□□□□ -0.72
CD28-203ENST00000458610 SPANXA1Q9NS26 97 aa10.55□□□□□ -0.72
CD28-203ENST00000458610 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
CD28-203ENST00000458610 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
CD28-203ENST00000458610 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
CD28-203ENST00000458610 G0S2P27469 103 aa10.54□□□□□ -0.72
CD28-203ENST00000458610 XGP55808 180 aa10.54□□□□□ -0.72
CD28-203ENST00000458610 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
CD28-203ENST00000458610 MT-ND6P03923 174 aa10.53□□□□□ -0.72
CD28-203ENST00000458610 XCL1P47992 114 aa10.53□□□□□ -0.72
CD28-203ENST00000458610 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
CD28-203ENST00000458610 Q8N1X5 172 aa10.53□□□□□ -0.72
CD28-203ENST00000458610 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
CD28-203ENST00000458610 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
CD28-203ENST00000458610 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
CD28-203ENST00000458610 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
CD28-203ENST00000458610 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
CD28-203ENST00000458610 FOXI1Q12951 378 aa10.51□□□□□ -0.73
CD28-203ENST00000458610 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
CD28-203ENST00000458610 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
CD28-203ENST00000458610 HERC2O95714 4834 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 TRAV13-1A0A0B4J241 112 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 MALP21145 153 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 Q6ZSA8 131 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 Q6ZUT4 128 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
CD28-203ENST00000458610 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
CD28-203ENST00000458610 PRSS3P2Q8NHM4 247 aa10.48□□□□□ -0.73
CD28-203ENST00000458610 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
CD28-203ENST00000458610 GVQW2A0A096LPI5 108 aaPredicted RBP10.47□□□□□ -0.73
CD28-203ENST00000458610 COX7A2LO14548 114 aa10.47□□□□□ -0.73
CD28-203ENST00000458610 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
CD28-203ENST00000458610 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
CD28-203ENST00000458610 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
CD28-203ENST00000458610 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 EPM2AB3EWF7 344 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 APOMO95445 188 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 NPSP0C0P6 89 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 C2orf66Q6UXQ4 117 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 Q6ZN92 141 aa10.46□□□□□ -0.73
CD28-203ENST00000458610 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 LINC01549A6NIU2 74 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 IFITM10A6NMD0 228 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
CD28-203ENST00000458610 CHAC1Q9BUX1 264 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 SMCO4Q9NRQ5 59 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
CD28-203ENST00000458610 TEX43Q6ZNM6 134 aa10.44□□□□□ -0.74
CD28-203ENST00000458610 OPRPNQ99935 248 aaPredicted RBP10.44□□□□□ -0.74
CD28-203ENST00000458610 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
CD28-203ENST00000458610 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
CD28-203ENST00000458610 RYR1P21817 5038 aa10.44□□□□□ -0.74
CD28-203ENST00000458610 TGIF2-C20orf24A0A0A6YYL0 155 aa10.43□□□□□ -0.74
CD28-203ENST00000458610 SDIM1Q6ZPB5 146 aa10.43□□□□□ -0.74
CD28-203ENST00000458610 VCX2Q9H322 139 aa10.43□□□□□ -0.74
CD28-203ENST00000458610 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
CD28-203ENST00000458610 SMR3BP02814 79 aaPredicted RBP10.42□□□□□ -0.74
CD28-203ENST00000458610 SLPIP03973 132 aa10.42□□□□□ -0.74
CD28-203ENST00000458610 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
CD28-203ENST00000458610 SCO1O75880 301 aa10.41□□□□□ -0.74
CD28-203ENST00000458610 FA2HQ7L5A8 372 aa10.41□□□□□ -0.74
CD28-203ENST00000458610 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms