RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 A0A087WW49 117 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 RBMY1BA6NDE4 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 RBMY1EA6NEQ0 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 NXPH4O95158 308 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 IGHV4-59P01825 116 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 RBMY1DP0C7P1 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 TRPT1Q86TN4 253 aaKnown RBP8.64□□□□□ -1.03
SYNE2-207ENST00000458046 CENPEQ02224 2701 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 IGHV4-31P0DP07 118 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 POM121L12Q8N7R1 296 aa8.64□□□□□ -1.03
SYNE2-207ENST00000458046 IGLV4-69A0A075B6H9 119 aa8.63□□□□□ -1.03
SYNE2-207ENST00000458046 ETDBQ3ZM63 59 aa8.63□□□□□ -1.03
SYNE2-207ENST00000458046 F8W1H4 67 aa8.63□□□□□ -1.03
SYNE2-207ENST00000458046 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
SYNE2-207ENST00000458046 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-207ENST00000458046 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
SYNE2-207ENST00000458046 COX6B1P14854 86 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 PSMB8P28062 276 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-207ENST00000458046 LINC01549A6NIU2 74 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 ZNF56Q15929 161 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
SYNE2-207ENST00000458046 IGHV3-16A0A0C4DH30 117 aa8.61□□□□□ -1.03
SYNE2-207ENST00000458046 B4DSR2 109 aa8.61□□□□□ -1.03
SYNE2-207ENST00000458046 APOMO95445 188 aa8.61□□□□□ -1.03
SYNE2-207ENST00000458046 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
SYNE2-207ENST00000458046 PDZD2O15018 2839 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 A0A0J9YX75 114 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 LOC100131303A0A0U1RQF7 123 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 PFN2P35080 140 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 KNCNA6PVL3 124 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 HTN1P15515 57 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 TSPEAR-AS2P59090 65 aa8.6□□□□□ -1.03
SYNE2-207ENST00000458046 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
SYNE2-207ENST00000458046 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 HERVK_113P61574 105 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 M0QY20 66 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 LGALS9O00182 355 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 BEAN1Q3B7T3 259 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 TMEM141Q96I45 108 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 CUBNO60494 3623 aa8.59□□□□□ -1.03
SYNE2-207ENST00000458046 A0A0J9YY99 117 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 INSL3P51460 131 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 NDUFV3P56181 108 aaKnown RBP8.58□□□□□ -1.04
SYNE2-207ENST00000458046 SEC61BP60468 96 aaKnown RBP8.58□□□□□ -1.04
SYNE2-207ENST00000458046 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
SYNE2-207ENST00000458046 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 K7EQG2 157 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 PSMB2P49721 201 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 UBE2D1P51668 147 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 PRM2P04554 102 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 P0DMU3 169 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 Q6ZRU5 148 aa8.57□□□□□ -1.04
SYNE2-207ENST00000458046 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
SYNE2-207ENST00000458046 FAM218AQ96MZ4 157 aa8.56□□□□□ -1.04
SYNE2-207ENST00000458046 ZNF580Q9UK33 172 aa8.56□□□□□ -1.04
SYNE2-207ENST00000458046 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
SYNE2-207ENST00000458046 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
SYNE2-207ENST00000458046 PROK1P58294 105 aa8.55□□□□□ -1.04
SYNE2-207ENST00000458046 FAM19A3Q7Z5A8 133 aa8.55□□□□□ -1.04
SYNE2-207ENST00000458046 C3orf22Q8N5N4 141 aa8.55□□□□□ -1.04
SYNE2-207ENST00000458046 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
SYNE2-207ENST00000458046 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 CFC1P0CG37 223 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-207ENST00000458046 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
SYNE2-207ENST00000458046 DEFB136Q30KP8 78 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 AMELXQ99217 191 aa8.54□□□□□ -1.04
SYNE2-207ENST00000458046 TRAV4A0A0B4J268 109 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 TEX29Q8N6K0 151 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 C20orf203Q8NBC4 194 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 I3L3M4 83 aa8.53□□□□□ -1.04
SYNE2-207ENST00000458046 HERVK_113P63121 156 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms