RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 A0A087WX48 190 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 LOC100131303A0A0U1RQF7 123 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 UBE2L6O14933 153 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 HTN3P15516 51 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 RPL39P62891 51 aaKnown RBP6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 ODF1Q14990 250 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 PMVKQ15126 192 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 KRTAP4-2Q9BYR5 136 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 UBE2D4Q9Y2X8 147 aa6.22□□□□□ -1.41
CDC42EP3-204ENST00000457889 DEFB131BA0A096LNP1 70 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 HSBP1L1C9JCN9 74 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 F8VRH5 84 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 DPM2O94777 84 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 DGAT2L7PQ6IED9 249 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 NTM-AS1Q6ZSK4 140 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 C15orf53Q8NAA6 179 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 BAALCQ8WXS3 180 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 TMEM101Q96IK0 257 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 VCX2Q9H322 139 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 A0A096LPF7 62 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 A0A0J9YY99 117 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 H0Y8G0 127 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 FGF6P10767 208 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 LELP1Q5T871 98 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 AMMECR1LQ6DCA0 310 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 AMELXQ99217 191 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
CDC42EP3-204ENST00000457889 DNHD1Q96M86 4753 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 A0A1B0GUV1 79 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGKV2-29A2NJV5 120 aaPredicted RBP6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 PRSS29PA6NIE9 313 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGKCP01834 107 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 SEC11AP67812 179 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 CHTOPQ9Y3Y2 248 aaKnown RBP6.19□□□□□ -1.42
CDC42EP3-204ENST00000457889 TSTD3H0UI37 97 aa6.18□□□□□ -1.42
CDC42EP3-204ENST00000457889 DEFA6Q01524 100 aa6.18□□□□□ -1.42
CDC42EP3-204ENST00000457889 NFE4Q86UQ8 179 aa6.18□□□□□ -1.42
CDC42EP3-204ENST00000457889 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
CDC42EP3-204ENST00000457889 TRAV8-6A0A0B4J262 113 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 CCL25O15444 150 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 ZNF664Q8N3J9 261 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 DEFB104AQ8WTQ1 72 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
CDC42EP3-204ENST00000457889 Q6ZUT4 128 aa6.16□□□□□ -1.42
CDC42EP3-204ENST00000457889 FAM19A3Q7Z5A8 133 aa6.16□□□□□ -1.42
CDC42EP3-204ENST00000457889 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 TCTAP57738 103 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 HERVK_113P61574 105 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 GAGE6Q13070 117 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
CDC42EP3-204ENST00000457889 NUPR2A6NF83 97 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 UBE2D1P51668 147 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 RBX1P62877 108 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 HERVK_113P63121 156 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 ZC2HC1BQ5TFG8 222 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 CEMP1Q6PRD7 247 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 CHAC1Q9BUX1 264 aa6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
CDC42EP3-204ENST00000457889 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
CDC42EP3-204ENST00000457889 TMEM262E9PQX1 116 aa6.13□□□□□ -1.43
CDC42EP3-204ENST00000457889 H3BRM9 83 aa6.13□□□□□ -1.43
CDC42EP3-204ENST00000457889 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
CDC42EP3-204ENST00000457889 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 hDV102S1A0JD36 115 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 E9PLD3 99 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 K7EP13 123 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 DLEU1O43261 78 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 CCL18P55774 89 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 KLK5Q9Y337 293 aaPredicted RBP6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 MRPS16Q9Y3D3 137 aaKnown RBP6.12□□□□□ -1.43
CDC42EP3-204ENST00000457889 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 A0A0J9YXV3 536 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 COX8AP10176 69 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 LINC01556Q5JQF7 62 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 TMEM170BQ5T4T1 132 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 MIEN1Q9BRT3 115 aa6.11□□□□□ -1.43
CDC42EP3-204ENST00000457889 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms