RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 NDUFA1O15239 70 aa8.81□□□□□ -1
SF3B4-202ENST00000457312 SCGB1C1Q8TD33 95 aa8.81□□□□□ -1
SF3B4-202ENST00000457312 KIR2DL4Q99706 377 aa8.81□□□□□ -1
SF3B4-202ENST00000457312 NAP1L6A6NFF2 107 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 LCE2BO14633 110 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 LTAP01374 205 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 C5orf38Q86SI9 138 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 RAB24Q969Q5 203 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 FMC1Q96HJ9 113 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 KRTAP9-8Q9BYQ0 159 aa8.8□□□□□ -1
SF3B4-202ENST00000457312 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
SF3B4-202ENST00000457312 KRTAP13-1Q8IUC0 172 aa8.79□□□□□ -1
SF3B4-202ENST00000457312 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
SF3B4-202ENST00000457312 MUC12Q9UKN1 5478 aa8.78□□□□□ -1
SF3B4-202ENST00000457312 F8WDY8 70 aa8.78□□□□□ -1
SF3B4-202ENST00000457312 HIST1H2BAQ96A08 127 aa8.78□□□□□ -1
SF3B4-202ENST00000457312 SEC22CQ9BRL7 303 aa8.78□□□□□ -1
SF3B4-202ENST00000457312 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
SF3B4-202ENST00000457312 H0YIZ8 118 aa8.77□□□□□ -1.01
SF3B4-202ENST00000457312 SMIM3Q9BZL3 60 aa8.77□□□□□ -1.01
SF3B4-202ENST00000457312 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
SF3B4-202ENST00000457312 UBE2G1P62253 170 aa8.76□□□□□ -1.01
SF3B4-202ENST00000457312 TMEM241Q24JQ0 296 aa8.76□□□□□ -1.01
SF3B4-202ENST00000457312 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
SF3B4-202ENST00000457312 ALG5Q9Y673 324 aa8.76□□□□□ -1.01
SF3B4-202ENST00000457312 CXorf1O96002 111 aa8.75□□□□□ -1.01
SF3B4-202ENST00000457312 HSPB11Q9Y547 144 aa8.75□□□□□ -1.01
SF3B4-202ENST00000457312 UBE2G2P60604 165 aa8.74□□□□□ -1.01
SF3B4-202ENST00000457312 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
SF3B4-202ENST00000457312 MRPL52Q86TS9 123 aaKnown RBP8.73□□□□□ -1.01
SF3B4-202ENST00000457312 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
SF3B4-202ENST00000457312 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
SF3B4-202ENST00000457312 GATD1Q8NB37 220 aa8.71□□□□□ -1.02
SF3B4-202ENST00000457312 RPL39LQ96EH5 51 aaKnown RBP8.71□□□□□ -1.02
SF3B4-202ENST00000457312 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
SF3B4-202ENST00000457312 FAM74A7A6NL05 159 aa8.7□□□□□ -1.02
SF3B4-202ENST00000457312 UBE2AP49459 152 aa8.7□□□□□ -1.02
SF3B4-202ENST00000457312 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
SF3B4-202ENST00000457312 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
SF3B4-202ENST00000457312 IGLC6P0CF74 106 aa8.69□□□□□ -1.02
SF3B4-202ENST00000457312 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
SF3B4-202ENST00000457312 PACRGQ96M98 296 aaPredicted RBP8.69□□□□□ -1.02
SF3B4-202ENST00000457312 CNPY1Q3B7I2 92 aa8.68□□□□□ -1.02
SF3B4-202ENST00000457312 RNASE13Q5GAN3 156 aaKnown RBP8.68□□□□□ -1.02
SF3B4-202ENST00000457312 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
SF3B4-202ENST00000457312 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
SF3B4-202ENST00000457312 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
SF3B4-202ENST00000457312 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
SF3B4-202ENST00000457312 LINC00846Q9NV44 126 aa8.67□□□□□ -1.02
SF3B4-202ENST00000457312 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
SF3B4-202ENST00000457312 DEFA1P59665 94 aa8.66□□□□□ -1.02
SF3B4-202ENST00000457312 MZT2BQ6NZ67 158 aa8.66□□□□□ -1.02
SF3B4-202ENST00000457312 NKX6-2Q9C056 277 aaPredicted RBP8.66□□□□□ -1.02
SF3B4-202ENST00000457312 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 SIX6O95475 246 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 ATP6V1G2O95670 118 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 AKR1C3P42330 323 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 TRIQKQ629K1 86 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 CYTL1Q9NRR1 136 aa8.65□□□□□ -1.02
SF3B4-202ENST00000457312 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
SF3B4-202ENST00000457312 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
SF3B4-202ENST00000457312 Q8NBF4 154 aa8.64□□□□□ -1.03
SF3B4-202ENST00000457312 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
SF3B4-202ENST00000457312 CENPXA8MT69 81 aa8.63□□□□□ -1.03
SF3B4-202ENST00000457312 I3L3M4 83 aa8.63□□□□□ -1.03
SF3B4-202ENST00000457312 SPINK1P00995 79 aa8.63□□□□□ -1.03
SF3B4-202ENST00000457312 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
SF3B4-202ENST00000457312 ACTR3CQ9C0K3 210 aaPredicted RBP8.63□□□□□ -1.03
SF3B4-202ENST00000457312 ATP6V0CP27449 155 aa8.62□□□□□ -1.03
SF3B4-202ENST00000457312 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
SF3B4-202ENST00000457312 Q8N377 158 aa8.62□□□□□ -1.03
SF3B4-202ENST00000457312 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
SF3B4-202ENST00000457312 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 PMCHP20382 165 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
SF3B4-202ENST00000457312 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 NUDT15Q9NV35 164 aa8.61□□□□□ -1.03
SF3B4-202ENST00000457312 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
SF3B4-202ENST00000457312 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
SF3B4-202ENST00000457312 PSMG3Q9BT73 122 aaPredicted RBP8.6□□□□□ -1.03
SF3B4-202ENST00000457312 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
SF3B4-202ENST00000457312 CCDC160A6NGH7 325 aa8.59□□□□□ -1.03
SF3B4-202ENST00000457312 MBP02144 154 aa8.59□□□□□ -1.03
SF3B4-202ENST00000457312 PRLHP81277 87 aa8.59□□□□□ -1.03
SF3B4-202ENST00000457312 Q6ZUT4 128 aa8.59□□□□□ -1.03
SF3B4-202ENST00000457312 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
SF3B4-202ENST00000457312 UPK1BO75841 260 aa8.58□□□□□ -1.04
SF3B4-202ENST00000457312 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
SF3B4-202ENST00000457312 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
SF3B4-202ENST00000457312 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
SF3B4-202ENST00000457312 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
SF3B4-202ENST00000457312 BAGE2Q86Y30 109 aa8.57□□□□□ -1.04
SF3B4-202ENST00000457312 PPP1R1CQ8WVI7 109 aa8.57□□□□□ -1.04
SF3B4-202ENST00000457312 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
SF3B4-202ENST00000457312 MT2AP02795 61 aa8.56□□□□□ -1.04
SF3B4-202ENST00000457312 PNRC1Q12796 327 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms