RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
PTPN6-204ENST00000456013 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
PTPN6-204ENST00000456013 Q6Q795 121 aa12.71□□□□□ -0.37
PTPN6-204ENST00000456013 LINC00308Q8TCZ7 52 aa12.71□□□□□ -0.38
PTPN6-204ENST00000456013 Q9H8V8 135 aa12.71□□□□□ -0.38
PTPN6-204ENST00000456013 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
PTPN6-204ENST00000456013 USP9XQ93008 2570 aaPredicted RBP12.7□□□□□ -0.38
PTPN6-204ENST00000456013 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
PTPN6-204ENST00000456013 KHDC1LQ5JSQ8 128 aa12.7□□□□□ -0.38
PTPN6-204ENST00000456013 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
PTPN6-204ENST00000456013 XCL2Q9UBD3 114 aa12.7□□□□□ -0.38
PTPN6-204ENST00000456013 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
PTPN6-204ENST00000456013 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
PTPN6-204ENST00000456013 C15orf53Q8NAA6 179 aa12.69□□□□□ -0.38
PTPN6-204ENST00000456013 FLNCQ14315 2725 aa12.68□□□□□ -0.38
PTPN6-204ENST00000456013 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-204ENST00000456013 LINC00694P0DN24 101 aa12.68□□□□□ -0.38
PTPN6-204ENST00000456013 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
PTPN6-204ENST00000456013 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
PTPN6-204ENST00000456013 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
PTPN6-204ENST00000456013 FAM240AA0A1B0GVK7 77 aa12.67□□□□□ -0.38
PTPN6-204ENST00000456013 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
PTPN6-204ENST00000456013 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
PTPN6-204ENST00000456013 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
PTPN6-204ENST00000456013 TRGV1A0A0A0MS02 117 aa12.66□□□□□ -0.38
PTPN6-204ENST00000456013 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
PTPN6-204ENST00000456013 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
PTPN6-204ENST00000456013 RPL36AP83881 106 aaKnown RBP12.66□□□□□ -0.38
PTPN6-204ENST00000456013 RPL36ALQ969Q0 106 aaKnown RBP12.66□□□□□ -0.38
PTPN6-204ENST00000456013 USP9YO00507 2555 aaPredicted RBP12.66□□□□□ -0.38
PTPN6-204ENST00000456013 STHQ8IWL8 128 aa12.66□□□□□ -0.38
PTPN6-204ENST00000456013 K7EQD1 137 aa12.65□□□□□ -0.38
PTPN6-204ENST00000456013 NTM-AS1Q6ZSK4 140 aa12.65□□□□□ -0.38
PTPN6-204ENST00000456013 ZNF625Q96I27 306 aaPredicted RBP12.65□□□□□ -0.38
PTPN6-204ENST00000456013 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
PTPN6-204ENST00000456013 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
PTPN6-204ENST00000456013 NDUFA7O95182 113 aa12.65□□□□□ -0.38
PTPN6-204ENST00000456013 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
PTPN6-204ENST00000456013 DAZ4Q86SG3 579 aaKnown RBP12.65□□□□□ -0.38
PTPN6-204ENST00000456013 DAZ3Q9NR90 486 aaKnown RBP12.65□□□□□ -0.38
PTPN6-204ENST00000456013 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.39
PTPN6-204ENST00000456013 TTC32Q5I0X7 151 aa12.64□□□□□ -0.39
PTPN6-204ENST00000456013 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
PTPN6-204ENST00000456013 COX7A2LO14548 114 aa12.64□□□□□ -0.39
PTPN6-204ENST00000456013 GAGE5Q13069 117 aa12.64□□□□□ -0.39
PTPN6-204ENST00000456013 GAGE6Q13070 117 aa12.64□□□□□ -0.39
PTPN6-204ENST00000456013 TRAV13-1A0A0B4J241 112 aa12.63□□□□□ -0.39
PTPN6-204ENST00000456013 SHISA2Q6UWI4 295 aa12.63□□□□□ -0.39
PTPN6-204ENST00000456013 CDC42SE2Q9NRR3 84 aa12.63□□□□□ -0.39
PTPN6-204ENST00000456013 UTP20O75691 2785 aaKnown RBP12.63□□□□□ -0.39
PTPN6-204ENST00000456013 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
PTPN6-204ENST00000456013 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
PTPN6-204ENST00000456013 F5H768 121 aa12.62□□□□□ -0.39
PTPN6-204ENST00000456013 PRIMA1Q86XR5 153 aa12.62□□□□□ -0.39
PTPN6-204ENST00000456013 HERV-K104P63124 156 aa12.62□□□□□ -0.39
PTPN6-204ENST00000456013 Q6ZTI0 123 aa12.62□□□□□ -0.39
PTPN6-204ENST00000456013 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
PTPN6-204ENST00000456013 PPDPFQ9H3Y8 114 aa12.61□□□□□ -0.39
PTPN6-204ENST00000456013 FBN2P35556 2912 aa12.59□□□□□ -0.39
PTPN6-204ENST00000456013 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
PTPN6-204ENST00000456013 GAGE4Q13068 117 aa12.59□□□□□ -0.39
PTPN6-204ENST00000456013 IGSF10Q6WRI0 2623 aa12.58□□□□□ -0.39
PTPN6-204ENST00000456013 TRACP01848 142 aa12.57□□□□□ -0.4
PTPN6-204ENST00000456013 KRTAP10-9P60411 292 aa12.57□□□□□ -0.4
PTPN6-204ENST00000456013 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
PTPN6-204ENST00000456013 DEFB113Q30KQ7 82 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 Q96MF0 132 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 TMEM243Q9BU79 118 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 B5MCH6 92 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 GAGE7O76087 117 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 ACYP1P07311 99 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
PTPN6-204ENST00000456013 POLQO75417 2590 aa12.55□□□□□ -0.4
PTPN6-204ENST00000456013 UBE2L6O14933 153 aa12.55□□□□□ -0.4
PTPN6-204ENST00000456013 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
PTPN6-204ENST00000456013 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
PTPN6-204ENST00000456013 TRBV7-7A0A0K0K1E9 115 aa12.54□□□□□ -0.4
PTPN6-204ENST00000456013 CCL24O00175 119 aa12.54□□□□□ -0.4
PTPN6-204ENST00000456013 CCDC179H3BU77 68 aa12.53□□□□□ -0.4
PTPN6-204ENST00000456013 SS18L2Q9UHA2 77 aa12.53□□□□□ -0.4
PTPN6-204ENST00000456013 TEX15Q9BXT5 2789 aa12.53□□□□□ -0.4
PTPN6-204ENST00000456013 PF4P02776 101 aa12.52□□□□□ -0.4
PTPN6-204ENST00000456013 PIEZO1Q92508 2521 aa12.52□□□□□ -0.41
PTPN6-204ENST00000456013 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
PTPN6-204ENST00000456013 MYO18BQ8IUG5 2567 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 HIST2H2BCQ6DN03 193 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 TRAV13-2A0A0B4J235 113 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 PLAC8L1A1L4L8 177 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
PTPN6-204ENST00000456013 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 FAM222AQ5U5X8 452 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
PTPN6-204ENST00000456013 ACACBO00763 2458 aa12.5□□□□□ -0.41
PTPN6-204ENST00000456013 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
PTPN6-204ENST00000456013 FAM218AQ96MZ4 157 aa12.5□□□□□ -0.41
PTPN6-204ENST00000456013 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
PTPN6-204ENST00000456013 TRBV6-4A0A1B0GX49 114 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms