RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TAGLN2P37802 199 aaKnown RBP3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 XCL1P47992 114 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 C21orf62-AS1Q17RA5 79 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PYY3Q5JQD4 70 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 FER1L6-AS1Q8NA97 138 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 OR2D3Q8NGH3 330 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CHCHD10Q8WYQ3 142 aaPredicted RBP3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RNF185Q96GF1 192 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 C14orf144Q96I85 54 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 MLST8Q9BVC4 326 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SSBP4Q9BWG4 385 aaPredicted RBP3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 GVQW2A0A096LPI5 108 aaPredicted RBP3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TGIF2-C20orf24A0A0A6YYL0 155 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TCAPO15273 167 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CXCL1P09341 107 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 G0S2P27469 103 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 DDTP30046 118 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TMEM97Q5BJF2 176 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RASL11AQ6T310 242 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST3H2BBQ8N257 126 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TRBV20OR9-2A0A075B6H5 130 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TRAV8-4A0A0B4J246 113 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 IFITM10A6NMD0 228 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 P01737 135 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 SRP19P09132 144 aaKnown RBP3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TRGC1P0CF51 173 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 FOXA3P55318 350 aaPredicted RBP3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 KRTAP10-8P60410 259 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CCL20P78556 96 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 FOXI1Q12951 378 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 COTL1Q14019 142 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RNASEKQ6P5S7 137 aaKnown RBP3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CARD19Q96LW7 228 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 PACRGQ96M98 296 aaPredicted RBP3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
HLA-DPA3-207ENST00000454398 A0A1B0GUV1 79 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 H7C1H1 209 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CCL25O15444 150 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BKO60814 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TRGC2P03986 189 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BJP06899 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 BCL2P10415 239 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 FGF6P10767 208 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 NTF3P20783 257 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BOP23527 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BBP33778 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CTRLP40313 264 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BDP58876 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BCP62807 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST2H2BEQ16778 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RNASE13Q5GAN3 156 aaKnown RBP3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 REG3GQ6UW15 175 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 LYZL1Q6UWQ5 148 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BHQ93079 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 PGLYRP4Q96LB8 373 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 YPEL4Q96NS1 127 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BNQ99877 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BMQ99879 126 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 C2orf88Q9BSF0 95 aa3.69□□□□□ -1.82
HLA-DPA3-207ENST00000454398 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 C19orf71A6NCJ1 209 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 APCSP02743 223 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 GNG4P50150 75 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 PRR26Q8N8Z3 221 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 C11orf52Q96A22 123 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TMEM242Q9NWH2 141 aa3.68□□□□□ -1.82
HLA-DPA3-207ENST00000454398 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 IFNA1P01562 189 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 ZNF25P17030 456 aaPredicted RBP3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 PTTG1IPP53801 180 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CACNG7P62955 275 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RPL18AQ02543 176 aaKnown RBP3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TWIST1Q15672 202 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 ADIRFQ15847 76 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 SPINK6Q6UWN8 80 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 MBD3L1Q8WWY6 194 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RNASE7Q9H1E1 156 aaKnown RBP3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 SMDT1Q9H4I9 107 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 PSORS1C2Q9UIG4 136 aa3.67□□□□□ -1.82
HLA-DPA3-207ENST00000454398 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 XKRY2A2RUG3 117 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 K7EN84 100 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 M0R143 59 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 TSHBP01222 138 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 MT-ND6P03923 174 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 RAB4AP20338 218 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 CAMPP49913 170 aa3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 SRSF9Q13242 221 aaKnown RBP eCLIP3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 JOSD1Q15040 202 aaPredicted RBP3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
HLA-DPA3-207ENST00000454398 Q6ZRP5 223 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms