RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
COL27A1-202ENST00000451716 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 VCYO14598 125 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 MAP6D1Q9H9H5 199 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 P0DMU3 169 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 FAM231AP0DMU4 169 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 FAM231CP0DMU5 169 aa8.84□□□□□ -0.99
COL27A1-202ENST00000451716 SETXQ7Z333 2677 aaKnown RBP8.84□□□□□ -1
COL27A1-202ENST00000451716 CD28P10747 220 aa8.83□□□□□ -1
COL27A1-202ENST00000451716 M0R2P5 195 aa8.83□□□□□ -1
COL27A1-202ENST00000451716 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
COL27A1-202ENST00000451716 NACAE9PAV3 2078 aa8.83□□□□□ -1
COL27A1-202ENST00000451716 Q9UF83 564 aa8.83□□□□□ -1
COL27A1-202ENST00000451716 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 TRBV27A0A0K0K1C4 114 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 IGIPA6NJ69 53 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 OTOGQ6ZRI0 2925 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 KRTAP1-1Q07627 177 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
COL27A1-202ENST00000451716 UQCRQO14949 82 aa8.81□□□□□ -1
COL27A1-202ENST00000451716 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
COL27A1-202ENST00000451716 OXTP01178 125 aa8.81□□□□□ -1
COL27A1-202ENST00000451716 TMEM86BQ8N661 226 aa8.81□□□□□ -1
COL27A1-202ENST00000451716 XCL2Q9UBD3 114 aa8.81□□□□□ -1
COL27A1-202ENST00000451716 C11orf86A6NJI1 115 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 SCGB1C2P0DMR2 95 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 PLA2G2AP14555 144 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 LINC00336Q6ZUF6 198 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 TRAV2A0A0B4J234 112 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 TRBV6-5A0A0K0K1A5 114 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 CCL24O00175 119 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 HIST1H4GQ99525 98 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 HIVEP2P31629 2446 aa8.8□□□□□ -1
COL27A1-202ENST00000451716 IGLV4-69A0A075B6H9 119 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 FAM236CP0DP71 79 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 DPH3Q96FX2 82 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 Q6ZSN1 163 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 A8MTW9 85 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 SMR3AQ99954 134 aa8.79□□□□□ -1
COL27A1-202ENST00000451716 J3QKU1 62 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 PMVKQ15126 192 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 LINC01006Q8NI28 216 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 TRAV8-4A0A0B4J246 113 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 A0A0U1RRA0 63 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
COL27A1-202ENST00000451716 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
COL27A1-202ENST00000451716 FN1P02751 2386 aaKnown RBP8.77□□□□□ -1.01
COL27A1-202ENST00000451716 TMEM170BQ5T4T1 132 aa8.77□□□□□ -1.01
COL27A1-202ENST00000451716 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
COL27A1-202ENST00000451716 I3L3M4 83 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 TCL1BO95988 128 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 CEMP1Q6PRD7 247 aaPredicted RBP8.76□□□□□ -1.01
COL27A1-202ENST00000451716 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 TIMM17AQ99595 171 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 LINC01549A6NIU2 74 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 PLEKHB2Q96CS7 222 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 PYGO1Q9Y3Y4 419 aa8.76□□□□□ -1.01
COL27A1-202ENST00000451716 TAL2Q16559 108 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 STHQ8IWL8 128 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 C11orf72Q8NBR9 251 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 INSP01308 110 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 WFDC10AQ9H1F0 79 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 TEP1Q99973 2627 aaKnown RBP8.75□□□□□ -1.01
COL27A1-202ENST00000451716 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
COL27A1-202ENST00000451716 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
COL27A1-202ENST00000451716 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 SCGB1D4Q6XE38 83 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 SLC25A20O43772 301 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 RHOHQ15669 191 aa8.74□□□□□ -1.01
COL27A1-202ENST00000451716 LYRM7Q5U5X0 104 aa8.73□□□□□ -1.01
COL27A1-202ENST00000451716 C1orf158Q8N1D5 194 aa8.73□□□□□ -1.01
COL27A1-202ENST00000451716 NTN5Q8WTR8 489 aaPredicted RBP8.73□□□□□ -1.01
COL27A1-202ENST00000451716 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
COL27A1-202ENST00000451716 UBE2D3P61077 147 aa8.73□□□□□ -1.01
COL27A1-202ENST00000451716 UBE2D2P62837 147 aa8.73□□□□□ -1.01
COL27A1-202ENST00000451716 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
COL27A1-202ENST00000451716 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
COL27A1-202ENST00000451716 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
COL27A1-202ENST00000451716 PFN2P35080 140 aa8.72□□□□□ -1.01
COL27A1-202ENST00000451716 A0A0J9YXV3 536 aa8.71□□□□□ -1.01
COL27A1-202ENST00000451716 TRACP01848 142 aa8.71□□□□□ -1.01
COL27A1-202ENST00000451716 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 VWFP04275 2813 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 TRGV1A0A0A0MS02 117 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 A0A0U1RQV1 116 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 J3QQQ9 107 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 IGHV3-53P01767 116 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms