RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 IGHV4OR15-8A0A075B7B6 117 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 A0A087WW49 117 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 hADV29S1A0JD25 119 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
UBE3B-204ENST00000449510 Q9UF83 564 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 INSP01308 110 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 TRACP01848 142 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 Q8N6K4 173 aa9.19□□□□□ -0.94
UBE3B-204ENST00000449510 XCL1P47992 114 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 IGHV4-4A0A075B6R2 117 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 B4DSR2 109 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 SOCS3O14543 225 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 TNRC18O15417 2968 aaPredicted RBP9.18□□□□□ -0.94
UBE3B-204ENST00000449510 TMEM86BQ8N661 226 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 UCNP55089 124 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 PEMTQ9UBM1 199 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 CSMD1Q96PZ7 3565 aa9.18□□□□□ -0.94
UBE3B-204ENST00000449510 COX6B1P14854 86 aa9.17□□□□□ -0.94
UBE3B-204ENST00000449510 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
UBE3B-204ENST00000449510 MALP21145 153 aa9.17□□□□□ -0.94
UBE3B-204ENST00000449510 HERVK_113P63121 156 aa9.17□□□□□ -0.94
UBE3B-204ENST00000449510 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
UBE3B-204ENST00000449510 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 LOC107984640A0A0U1RRK4 108 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 A0A1W2PPR1 153 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 EBI3Q14213 229 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 IGF2-ASQ6U949 168 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 COX8CQ7Z4L0 72 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 TMEM61Q8N0U2 210 aa9.16□□□□□ -0.94
UBE3B-204ENST00000449510 CHD6Q8TD26 2715 aa9.15□□□□□ -0.94
UBE3B-204ENST00000449510 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
UBE3B-204ENST00000449510 IGHG2P01859 326 aa9.15□□□□□ -0.94
UBE3B-204ENST00000449510 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
UBE3B-204ENST00000449510 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
UBE3B-204ENST00000449510 TMEM243Q9BU79 118 aa9.15□□□□□ -0.95
UBE3B-204ENST00000449510 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.95
UBE3B-204ENST00000449510 RELNP78509 3460 aa9.15□□□□□ -0.95
UBE3B-204ENST00000449510 ZNF292O60281 2723 aa9.15□□□□□ -0.95
UBE3B-204ENST00000449510 ANKRD17O75179 2603 aaKnown RBP9.14□□□□□ -0.95
UBE3B-204ENST00000449510 TRAV23DV6A0A075B6W5 121 aa9.14□□□□□ -0.95
UBE3B-204ENST00000449510 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
UBE3B-204ENST00000449510 LINC01619G3V211 115 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 A0A087WVE0 104 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 M0QXV9 152 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 NCR3O14931 201 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 CUBNO60494 3623 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 ODF3Q96PU9 254 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 LST1O00453 97 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
UBE3B-204ENST00000449510 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
UBE3B-204ENST00000449510 C19orf84I3L1E1 186 aa9.12□□□□□ -0.95
UBE3B-204ENST00000449510 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
UBE3B-204ENST00000449510 KLLNB2CW77 178 aa9.12□□□□□ -0.95
UBE3B-204ENST00000449510 COX7A2LO14548 114 aa9.11□□□□□ -0.95
UBE3B-204ENST00000449510 Q6ZTI0 123 aa9.11□□□□□ -0.95
UBE3B-204ENST00000449510 TIRAPP58753 221 aa9.11□□□□□ -0.95
UBE3B-204ENST00000449510 C18orf65Q6ZTR6 163 aa9.1□□□□□ -0.95
UBE3B-204ENST00000449510 ACYP1P07311 99 aa9.1□□□□□ -0.95
UBE3B-204ENST00000449510 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
UBE3B-204ENST00000449510 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
UBE3B-204ENST00000449510 K7EQG2 157 aa9.09□□□□□ -0.95
UBE3B-204ENST00000449510 COX6A2Q02221 97 aa9.09□□□□□ -0.95
UBE3B-204ENST00000449510 Q6ZSN1 163 aa9.09□□□□□ -0.95
UBE3B-204ENST00000449510 PRO3102Q9H379 93 aa9.09□□□□□ -0.95
UBE3B-204ENST00000449510 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.96
UBE3B-204ENST00000449510 LINC00315P59091 139 aa9.09□□□□□ -0.96
UBE3B-204ENST00000449510 HIST2H2BCQ6DN03 193 aa9.09□□□□□ -0.96
UBE3B-204ENST00000449510 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-204ENST00000449510 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 KIF25-AS1Q9Y6Z4 181 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 ITPR1Q14643 2758 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 TRBV6-5A0A0K0K1A5 114 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 C20orf197Q8N268 126 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 UBL5Q9BZL1 73 aa9.08□□□□□ -0.96
UBE3B-204ENST00000449510 Q8N2B8 174 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 RNF152Q8N8N0 203 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 J3KT08 172 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 UQCRQO14949 82 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 NHLRC4P0CG21 123 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-204ENST00000449510 SVIPQ8NHG7 77 aa9.07□□□□□ -0.96
UBE3B-204ENST00000449510 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 ATOX1O00244 68 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 AVPP01185 164 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 COX7B2Q8TF08 81 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 A6NDX4 124 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 C11orf71Q6IPW1 123 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 NBEAL2Q6ZNJ1 2754 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms