RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 J3QL48 77 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
GTF3C3-206ENST00000448539 LECT2O14960 151 aa9.3□□□□□ -0.92
GTF3C3-206ENST00000448539 KIAA1644Q3SXP7 199 aa9.3□□□□□ -0.92
GTF3C3-206ENST00000448539 CDPF1Q6NVV7 123 aa9.3□□□□□ -0.92
GTF3C3-206ENST00000448539 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
GTF3C3-206ENST00000448539 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
GTF3C3-206ENST00000448539 MT-ND6P03923 174 aa9.29□□□□□ -0.92
GTF3C3-206ENST00000448539 Q8N814 137 aa9.29□□□□□ -0.92
GTF3C3-206ENST00000448539 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
GTF3C3-206ENST00000448539 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
GTF3C3-206ENST00000448539 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
GTF3C3-206ENST00000448539 Q8N8P6 123 aa9.28□□□□□ -0.92
GTF3C3-206ENST00000448539 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
GTF3C3-206ENST00000448539 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 WFDC2Q14508 124 aa9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 NXT2Q9NPJ8 142 aaKnown RBP9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 UBE2D4Q9Y2X8 147 aa9.27□□□□□ -0.93
GTF3C3-206ENST00000448539 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
GTF3C3-206ENST00000448539 TIMM21Q9BVV7 248 aa9.26□□□□□ -0.93
GTF3C3-206ENST00000448539 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
GTF3C3-206ENST00000448539 CSDC2Q9Y534 153 aaKnown RBP9.26□□□□□ -0.93
GTF3C3-206ENST00000448539 TRAPPC1Q9Y5R8 145 aa9.26□□□□□ -0.93
GTF3C3-206ENST00000448539 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
GTF3C3-206ENST00000448539 RPL39P62891 51 aaKnown RBP9.25□□□□□ -0.93
GTF3C3-206ENST00000448539 SS18Q15532 418 aa9.25□□□□□ -0.93
GTF3C3-206ENST00000448539 ORMDL2Q53FV1 153 aa9.25□□□□□ -0.93
GTF3C3-206ENST00000448539 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
GTF3C3-206ENST00000448539 GAGE12HA6NDE8 117 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 K7EMI3 77 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 SMCO4Q9NRQ5 59 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 SPANXA1Q9NS26 97 aa9.24□□□□□ -0.93
GTF3C3-206ENST00000448539 LINC00959A0A1B0GUT2 108 aa9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 LCE2BO14633 110 aa9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 GCSHP23434 173 aa9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 ALKBH7Q9BT30 221 aaPredicted RBP9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 RYR1P21817 5038 aa9.23□□□□□ -0.93
GTF3C3-206ENST00000448539 G0S2P27469 103 aa9.22□□□□□ -0.93
GTF3C3-206ENST00000448539 RNASE13Q5GAN3 156 aaKnown RBP9.22□□□□□ -0.93
GTF3C3-206ENST00000448539 CFAP161Q6P656 301 aa9.22□□□□□ -0.93
GTF3C3-206ENST00000448539 Q6ZUT4 128 aa9.22□□□□□ -0.93
GTF3C3-206ENST00000448539 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
GTF3C3-206ENST00000448539 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 CCL25O15444 150 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 XCL1P47992 114 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 CBLN2Q8IUK8 224 aa9.21□□□□□ -0.94
GTF3C3-206ENST00000448539 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
GTF3C3-206ENST00000448539 FA2HQ7L5A8 372 aa9.2□□□□□ -0.94
GTF3C3-206ENST00000448539 PYGO1Q9Y3Y4 419 aa9.2□□□□□ -0.94
GTF3C3-206ENST00000448539 YPEL4Q96NS1 127 aa9.19□□□□□ -0.94
GTF3C3-206ENST00000448539 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
GTF3C3-206ENST00000448539 HSPG2P98160 4391 aa9.19□□□□□ -0.94
GTF3C3-206ENST00000448539 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 hDV102S1A0JD36 115 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 FOXI1Q12951 378 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 Q6ZN92 141 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
GTF3C3-206ENST00000448539 IFITM10A6NMD0 228 aa9.17□□□□□ -0.94
GTF3C3-206ENST00000448539 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
GTF3C3-206ENST00000448539 PRSS1P07477 247 aa9.17□□□□□ -0.94
GTF3C3-206ENST00000448539 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
GTF3C3-206ENST00000448539 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
GTF3C3-206ENST00000448539 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
GTF3C3-206ENST00000448539 MALP21145 153 aa9.16□□□□□ -0.94
GTF3C3-206ENST00000448539 TEX43Q6ZNM6 134 aa9.16□□□□□ -0.94
GTF3C3-206ENST00000448539 C2orf88Q9BSF0 95 aa9.16□□□□□ -0.94
GTF3C3-206ENST00000448539 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 LINC01549A6NIU2 74 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 COX7A2LO14548 114 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 NPSP0C0P6 89 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 TOMM6Q96B49 74 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 VCX2Q9H322 139 aa9.15□□□□□ -0.94
GTF3C3-206ENST00000448539 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 RAB5BP61020 215 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 C18orf32Q8TCD1 76 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
GTF3C3-206ENST00000448539 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms