RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 TIMM17BO60830 172 aa14.77□□□□□ -0.04
SMARCD2-203ENST00000448276 COX7A2LO14548 114 aa14.77□□□□□ -0.05
SMARCD2-203ENST00000448276 CIRBPQ14011 172 aaKnown RBP14.77□□□□□ -0.05
SMARCD2-203ENST00000448276 FAM218AQ96MZ4 157 aa14.77□□□□□ -0.05
SMARCD2-203ENST00000448276 IGSF10Q6WRI0 2623 aa14.77□□□□□ -0.05
SMARCD2-203ENST00000448276 EDA2RQ9HAV5 297 aa14.76□□□□□ -0.05
SMARCD2-203ENST00000448276 LINC00694P0DN24 101 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 HOXD3P31249 432 aaPredicted RBP14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 DEFB136Q30KP8 78 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 HIST2H2BDQ6DRA6 164 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 ZANQ9Y493 2812 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 TRAV13-1A0A0B4J241 112 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 C2CD3Q4AC94 2353 aa14.75□□□□□ -0.05
SMARCD2-203ENST00000448276 ACACBO00763 2458 aa14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 USP9XQ93008 2570 aaPredicted RBP14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 BAALC-AS2P0C853 105 aa14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 PIK3CD-AS1Q5SR53 167 aa14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 LINC00242Q5T6M2 205 aa14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 Q9HAA7 133 aa14.74□□□□□ -0.05
SMARCD2-203ENST00000448276 MYO18BQ8IUG5 2567 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 C18orf65Q6ZTR6 163 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 C22orf24Q9Y442 160 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 DEFB112Q30KQ8 113 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 C10orf105Q8TEF2 133 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 PPDPFQ9H3Y8 114 aa14.73□□□□□ -0.05
SMARCD2-203ENST00000448276 CCL19Q99731 98 aa14.72□□□□□ -0.05
SMARCD2-203ENST00000448276 MSMBP08118 114 aa14.72□□□□□ -0.05
SMARCD2-203ENST00000448276 IGLV5-45A0A087WSX0 123 aa14.72□□□□□ -0.05
SMARCD2-203ENST00000448276 TIRAPP58753 221 aa14.72□□□□□ -0.05
SMARCD2-203ENST00000448276 SLURP1P55000 103 aa14.71□□□□□ -0.05
SMARCD2-203ENST00000448276 PRIMA1Q86XR5 153 aa14.71□□□□□ -0.05
SMARCD2-203ENST00000448276 ZFYVE26Q68DK2 2539 aa14.71□□□□□ -0.06
SMARCD2-203ENST00000448276 BEAN1Q3B7T3 259 aa14.71□□□□□ -0.06
SMARCD2-203ENST00000448276 SMIM1B2RUZ4 78 aa14.7□□□□□ -0.06
SMARCD2-203ENST00000448276 ZNF415Q09FC8 603 aa14.7□□□□□ -0.06
SMARCD2-203ENST00000448276 KLK5Q9Y337 293 aaPredicted RBP14.7□□□□□ -0.06
SMARCD2-203ENST00000448276 CENPEQ02224 2701 aa14.7□□□□□ -0.06
SMARCD2-203ENST00000448276 IGLV5-39A0A0G2JS06 123 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 RS1O15537 224 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 IGHV3-53P01767 116 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 C9orf153Q5TBE3 101 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 ATP5J2P56134 94 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 GAGE2AQ6NT46 116 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 NOTCH3Q9UM47 2321 aa14.69□□□□□ -0.06
SMARCD2-203ENST00000448276 ACYP1P07311 99 aa14.68□□□□□ -0.06
SMARCD2-203ENST00000448276 LINC00643Q86TS7 51 aa14.68□□□□□ -0.06
SMARCD2-203ENST00000448276 C11orf72Q8NBR9 251 aa14.68□□□□□ -0.06
SMARCD2-203ENST00000448276 RNF152Q8N8N0 203 aa14.67□□□□□ -0.06
SMARCD2-203ENST00000448276 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
SMARCD2-203ENST00000448276 DOPEY1Q5JWR5 2465 aa14.66□□□□□ -0.06
SMARCD2-203ENST00000448276 HERVK_113P63121 156 aa14.66□□□□□ -0.06
SMARCD2-203ENST00000448276 TMEM126AQ9H061 195 aa14.66□□□□□ -0.06
SMARCD2-203ENST00000448276 CFAP161Q6P656 301 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 MXRA5Q9NR99 2828 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 USP9YO00507 2555 aaPredicted RBP14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 C3orf22Q8N5N4 141 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 MAPK1IP1LQ8NDC0 245 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 NRGNQ92686 78 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 IMUPQ9GZP8 106 aa14.65□□□□□ -0.06
SMARCD2-203ENST00000448276 TMEM89A2RUT3 159 aa14.65□□□□□ -0.07
SMARCD2-203ENST00000448276 C9orf129Q5T035 196 aaKnown RBP14.65□□□□□ -0.07
SMARCD2-203ENST00000448276 LOC107984640A0A0U1RRK4 108 aa14.64□□□□□ -0.07
SMARCD2-203ENST00000448276 Q96MF0 132 aa14.63□□□□□ -0.07
SMARCD2-203ENST00000448276 TRACP01848 142 aa14.63□□□□□ -0.07
SMARCD2-203ENST00000448276 XCL2Q9UBD3 114 aa14.63□□□□□ -0.07
SMARCD2-203ENST00000448276 NTM-AS1Q6ZSK4 140 aa14.62□□□□□ -0.07
SMARCD2-203ENST00000448276 DNAJC30Q96LL9 226 aa14.62□□□□□ -0.07
SMARCD2-203ENST00000448276 POLQO75417 2590 aa14.62□□□□□ -0.07
SMARCD2-203ENST00000448276 FAM208BQ5VWN6 2430 aa14.62□□□□□ -0.07
SMARCD2-203ENST00000448276 UBE2E2Q96LR5 201 aa14.61□□□□□ -0.07
SMARCD2-203ENST00000448276 AKAP9Q99996 3911 aa14.61□□□□□ -0.07
SMARCD2-203ENST00000448276 F5H768 121 aa14.6□□□□□ -0.07
SMARCD2-203ENST00000448276 TRGV1A0A0A0MS02 117 aa14.59□□□□□ -0.07
SMARCD2-203ENST00000448276 SDIM1Q6ZPB5 146 aa14.59□□□□□ -0.07
SMARCD2-203ENST00000448276 LINC00337Q8N6G1 96 aa14.59□□□□□ -0.07
SMARCD2-203ENST00000448276 PEMTQ9UBM1 199 aa14.59□□□□□ -0.07
SMARCD2-203ENST00000448276 MAP6D1Q9H9H5 199 aa14.59□□□□□ -0.07
SMARCD2-203ENST00000448276 A0A087WYN8 130 aa14.58□□□□□ -0.07
SMARCD2-203ENST00000448276 IGKV3OR2-268A0A0C4DH90 116 aa14.58□□□□□ -0.07
SMARCD2-203ENST00000448276 MALP21145 153 aa14.58□□□□□ -0.07
SMARCD2-203ENST00000448276 UQCRQO14949 82 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 C5orf38Q86SI9 138 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 USP24Q9UPU5 2620 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 B4DSR2 109 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 HIST2H2BCQ6DN03 193 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 C14orf132Q9NPU4 83 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 TOMM7Q9P0U1 55 aa14.57□□□□□ -0.08
SMARCD2-203ENST00000448276 ATP5G1P05496 136 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 MIR7-3HGQ8N6C7 128 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 LINC00526Q96FQ7 95 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 IGKV2-28A0A075B6P5 120 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 IGKV3D-7A0A0C4DH55 119 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 A8MTW9 85 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 IGKV2D-28P01615 120 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 PRB1P04280 392 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 ZNF462Q96JM2 2506 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 CYSTM1Q9H1C7 97 aa14.56□□□□□ -0.08
SMARCD2-203ENST00000448276 CDC42SE2Q9NRR3 84 aa14.55□□□□□ -0.08
SMARCD2-203ENST00000448276 LRRK2Q5S007 2527 aa14.55□□□□□ -0.08
SMARCD2-203ENST00000448276 EPG5Q9HCE0 2579 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms