RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PCNX3Q9H6A9 2034 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 SMIM9A6NGZ8 99 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 DEFB114Q30KQ6 69 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 C6orf99Q4VX62 202 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 NRACQ8N912 160 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 USP17L23D6RBM5 183 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 LY6LH3BQJ8 138 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 LST1O00453 97 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 NDUFA7O95182 113 aa5.8□□□□□ -1.48
NEDD9-204ENST00000448183 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 KIF26AQ9ULI4 1882 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-204ENST00000448183 TRBV6-8A0A0A6YYG3 113 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 KIAA1549Q9HCM3 1950 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 ADAMTS9Q9P2N4 1935 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 DNAJC9-AS1A6NH13 148 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 TANC2Q9HCD6 1990 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
NEDD9-204ENST00000448183 NDUFC1O43677 76 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 C14orf177Q52M58 125 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 PRO3102Q9H379 93 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 CCKP06307 115 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 XGP55808 180 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 C22orf34Q6ZV56 151 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 RNASE3P12724 160 aaKnown RBP5.78□□□□□ -1.48
NEDD9-204ENST00000448183 POLR2KP53803 58 aaKnown RBP5.78□□□□□ -1.48
NEDD9-204ENST00000448183 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-204ENST00000448183 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
NEDD9-204ENST00000448183 XAGE1AQ9HD64 81 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 TSHBP01222 138 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 Q8N976 141 aa5.78□□□□□ -1.48
NEDD9-204ENST00000448183 A8MZ25 164 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 PROK1P58294 105 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 HCFC1P51610 2035 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 PCDH15Q96QU1 1955 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 COX7CP15954 63 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 ARHGAP32A7KAX9 2087 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 Q6YL49 198 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 C11orf45Q8TAV5 145 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 C11orf21Q9P2W6 132 aa5.77□□□□□ -1.49
NEDD9-204ENST00000448183 ALPK3Q96L96 1907 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 A0A096LNI7 61 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 A0A0U1RQV1 116 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 FAM19A3Q7Z5A8 133 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 KLK5Q9Y337 293 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-204ENST00000448183 DSCAMO60469 2012 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 LINC00310P59036 64 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 Q6ZQY7 126 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 Q6ZS46 218 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 C1orf158Q8N1D5 194 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 V9GYY9 64 aa5.76□□□□□ -1.49
NEDD9-204ENST00000448183 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 KLLNB2CW77 178 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 MRPS36P82909 103 aaKnown RBP5.75□□□□□ -1.49
NEDD9-204ENST00000448183 PRR9Q5T870 116 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 TMEM131Q92545 1883 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
NEDD9-204ENST00000448183 GAS8-AS1O95177 125 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 CRYGDP07320 174 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 SYCNQ0VAF6 134 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 UBE2D4Q9Y2X8 147 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 CD164L2Q6UWJ8 174 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 Q6Q795 121 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 Q8N6K4 173 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 C2orf16Q68DN1 1984 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 C3orf84H3BNL1 204 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 SMIM11BQ8TCY0 68 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 DCANP1Q8TF63 244 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 SNURFQ9Y675 71 aa5.74□□□□□ -1.49
NEDD9-204ENST00000448183 WFDC10BQ8IUB3 73 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 KIR2DL5BQ8NHK3 375 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 DEFB131BA0A096LNP1 70 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 MIFP14174 115 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 UBE2D1P51668 147 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 LRRC75A-AS1Q8N1F1 130 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 Q6JHZ5 121 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
NEDD9-204ENST00000448183 A0A087WZ39 114 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 C19orf84I3L1E1 186 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 IGHV4-31P0DP07 118 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 IGIPA6NJ69 53 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 C10orf99Q6UWK7 81 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 SRCAPQ6ZRS2 3230 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 PIEZO2Q9H5I5 2752 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 Q6ZSV7 163 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 BBC3Q96PG8 261 aaPredicted RBP5.72□□□□□ -1.49
NEDD9-204ENST00000448183 PRRC2AP48634 2157 aaKnown RBP5.72□□□□□ -1.49
NEDD9-204ENST00000448183 LINC00959A0A1B0GUT2 108 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 M0R378 163 aa5.72□□□□□ -1.49
NEDD9-204ENST00000448183 FAM19A5Q7Z5A7 132 aaPredicted RBP5.72□□□□□ -1.49
NEDD9-204ENST00000448183 C11orf71Q6IPW1 123 aa5.71□□□□□ -1.49
NEDD9-204ENST00000448183 DHRS4-AS1Q9P1J3 65 aa5.71□□□□□ -1.5
NEDD9-204ENST00000448183 PIEZO1Q92508 2521 aa5.71□□□□□ -1.5
NEDD9-204ENST00000448183 KIAA1549LQ6ZVL6 1849 aa5.71□□□□□ -1.5
NEDD9-204ENST00000448183 WFDC13Q8IUB5 93 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 MUC7Q8TAX7 377 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms