RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TWIST1Q15672 202 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 RASL11AQ6T310 242 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 GATD1Q8NB37 220 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 EIF5A2Q9GZV4 153 aaKnown RBP4.41□□□□□ -1.7
LRRC28-203ENST00000447360 NIT2Q9NQR4 276 aa4.41□□□□□ -1.7
LRRC28-203ENST00000447360 SLPIP03973 132 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 CEBPGP53567 150 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 RBX1P62877 108 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 GAGE6Q13070 117 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 IQCJQ1A5X6 159 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 TMEM97Q5BJF2 176 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 LINC01551Q86U37 167 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 CHCHD5Q9BSY4 110 aa4.4□□□□□ -1.71
LRRC28-203ENST00000447360 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 ZNF727A8MUV8 499 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 A8MWL6 223 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 H7C1H1 209 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 SNRPEP62304 92 aaKnown RBP4.39□□□□□ -1.71
LRRC28-203ENST00000447360 GAGE2BQ13066 116 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 GAGE2EQ4V326 116 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-203ENST00000447360 PGLYRP4Q96LB8 373 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 SMIM7Q9BQ49 75 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 GAGE2DQ9UEU5 116 aa4.39□□□□□ -1.71
LRRC28-203ENST00000447360 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 TRAV8-4A0A0B4J246 113 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 COX6A2Q02221 97 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 Q6ZRP5 223 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 STPG4Q8N801 248 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 SMDT1Q9H4I9 107 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 OSTCQ9NRP0 149 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 V9GYV3 84 aa4.38□□□□□ -1.71
LRRC28-203ENST00000447360 IGLV10-54A0A075B6I4 117 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 RPL23P62829 140 aaKnown RBP4.37□□□□□ -1.71
LRRC28-203ENST00000447360 TMEM241Q24JQ0 296 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 CLPSL2Q6UWE3 100 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 ZNF664Q8N3J9 261 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 TSKUQ8WUA8 353 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 ISOC2Q96AB3 205 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
LRRC28-203ENST00000447360 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
LRRC28-203ENST00000447360 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 A0A1B0GUT8 65 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 HIGD1CA8MV81 97 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 RAB4AP20338 218 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 RPS10P46783 165 aaKnown RBP4.36□□□□□ -1.71
LRRC28-203ENST00000447360 REG3AQ06141 175 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 COTL1Q14019 142 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 FAM74A3Q4VXF1 159 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 PRSS3P2Q8NHM4 247 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 TMEM191AQ9H0A3 160 aa4.36□□□□□ -1.71
LRRC28-203ENST00000447360 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 AMTP48728 403 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
LRRC28-203ENST00000447360 RAB14P61106 215 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 PEA15Q15121 130 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 CLLU1Q5K131 121 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 SMIM15Q7Z3B0 74 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
LRRC28-203ENST00000447360 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 I3L3M4 83 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 NCR2O95944 276 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 ESDP10768 282 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 ADIRFQ15847 76 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
LRRC28-203ENST00000447360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-203ENST00000447360 A0A096LNI7 61 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 IGKV2-29A2NJV5 120 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-203ENST00000447360 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 H7C423 109 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 UBE2L6O14933 153 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 TSHBP01222 138 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 PMCHP20382 165 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 RIGQ13278 110 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 PRR4Q16378 134 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 NDUFA5Q16718 116 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 NRACQ8N912 160 aa4.33□□□□□ -1.72
LRRC28-203ENST00000447360 BORCS7Q96B45 105 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms