RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 AKAP11Q9UKA4 1901 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 PVALEFA0A1B0GWK0 134 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 SPAG11BQ08648 103 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 SPINK13Q1W4C9 94 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 SPAG11AQ6PDA7 123 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 UQCR10Q9UDW1 63 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 R4GMQ9 66 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 ALKQ9UM73 1620 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 MYH9P35579 1960 aaKnown RBP1.64□□□□□ -2.15
LINC00440-201ENST00000446579 SLIT1O75093 1534 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 ZNF609O15014 1411 aa1.64□□□□□ -2.15
LINC00440-201ENST00000446579 PPRC1Q5VV67 1664 aaKnown RBP1.64□□□□□ -2.15
LINC00440-201ENST00000446579 OTOGLQ3ZCN5 2332 aa1.63□□□□□ -2.15
LINC00440-201ENST00000446579 CLPSL1A2RUU4 121 aa1.63□□□□□ -2.15
LINC00440-201ENST00000446579 DYNLRB1Q9NP97 96 aa1.63□□□□□ -2.15
LINC00440-201ENST00000446579 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
LINC00440-201ENST00000446579 CEP170BQ9Y4F5 1589 aaPredicted RBP1.63□□□□□ -2.15
LINC00440-201ENST00000446579 MRC1P22897 1456 aa1.63□□□□□ -2.15
LINC00440-201ENST00000446579 NFAT5O94916 1531 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 CPS1P31327 1500 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 CLTCQ00610 1675 aaKnown RBP1.62□□□□□ -2.15
LINC00440-201ENST00000446579 ZC3H13Q5T200 1668 aaKnown RBP1.62□□□□□ -2.15
LINC00440-201ENST00000446579 LOC285095A0A1B0GVY8 99 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 CRYM-AS1A6NIL9 109 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 CHKB-CPT1BH3BT56 60 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 SEC11AP67812 179 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 LENEPQ9Y5L5 61 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 V9GYS6 101 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 PIK3C2BO00750 1634 aa1.62□□□□□ -2.15
LINC00440-201ENST00000446579 TET1Q8NFU7 2136 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 ABCC6O95255 1503 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 DIP2AQ14689 1571 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 SMIM31A0A1B0GVY4 71 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 hADV29S1A0JD25 119 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 MT-ATP8P03928 68 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 TMEM170BQ5T4T1 132 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 ATG2AQ2TAZ0 1938 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 PPLO60437 1756 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 TMEM131LA2VDJ0 1609 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 CASP8AP2Q9UKL3 1982 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 MROH2AA6NES4 1674 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 AGLP35573 1532 aa1.61□□□□□ -2.15
LINC00440-201ENST00000446579 KNDC1Q76NI1 1749 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 IFT172Q9UG01 1749 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 F2Z2F3 143 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 FXYD6P3P58550 94 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 SNRPFP62306 86 aaKnown RBP1.6□□□□□ -2.15
LINC00440-201ENST00000446579 BAGE3Q86Y29 109 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 PMCHL2Q9BQD1 86 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 V9GYH0 126 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 ANKRD26Q9UPS8 1709 aa1.6□□□□□ -2.15
LINC00440-201ENST00000446579 DIP2CQ9Y2E4 1556 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 KIF20BQ96Q89 1820 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 A0A087WTM6 91 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 TRAPPC2P0DI81 140 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 TRAPPC2BP0DI82 140 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 Q0VG73 95 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 FAM213BQ8TBF2 198 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 WFDC6Q9BQY6 131 aa1.59□□□□□ -2.15
LINC00440-201ENST00000446579 NWD1Q149M9 1564 aa1.59□□□□□ -2.16
LINC00440-201ENST00000446579 ITSN1Q15811 1721 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 CRYBG1Q9Y4K1 1723 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 TRGV1A0A0A0MS02 117 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 A0A0G2JND7 137 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 NDUFC1O43677 76 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 ACYP2P14621 99 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 PRO1854Q9UHT4 67 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 PLXNA2O75051 1894 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 LRRC37A3O60309 1634 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 C3P01024 1663 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 MCM3APO60318 1980 aa1.58□□□□□ -2.16
LINC00440-201ENST00000446579 RGPD1P0DJD0 1748 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 XRN1Q8IZH2 1706 aaKnown RBP1.57□□□□□ -2.16
LINC00440-201ENST00000446579 ARAP2Q8WZ64 1704 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 DIP2BQ9P265 1576 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 CTXND1A0A1B0GTU2 59 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 M0R135 149 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 COX6CP09669 75 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 FAM167A-AS1Q96KT0 104 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 NDUFA4L2Q9NRX3 87 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 PHRF1Q9P1Y6 1649 aaKnown RBP1.57□□□□□ -2.16
LINC00440-201ENST00000446579 PREX1Q8TCU6 1659 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 MON2Q7Z3U7 1717 aa1.57□□□□□ -2.16
LINC00440-201ENST00000446579 C1orf167Q5SNV9 1468 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 RREB1Q92766 1687 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 FAM208AQ9UK61 1670 aaKnown RBP1.56□□□□□ -2.16
LINC00440-201ENST00000446579 A0A087WXM4 84 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 ATOX1O00244 68 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 HMGN4O00479 90 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 FAUP35544 74 aaKnown RBP1.56□□□□□ -2.16
LINC00440-201ENST00000446579 ZNF720Q7Z2F6 126 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 Q96NJ1 140 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 FAIMQ9NVQ4 179 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 PEAK1Q9H792 1746 aa1.56□□□□□ -2.16
LINC00440-201ENST00000446579 MUC22E2RYF6 1773 aaPredicted RBP1.56□□□□□ -2.16
LINC00440-201ENST00000446579 DLEC1Q9Y238 1755 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms