RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PIK3CD-AS1Q5SR53 167 aa10.11□□□□□ -0.79
VPS52-212ENST00000445902 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
VPS52-212ENST00000445902 CELSR2Q9HCU4 2923 aa10.11□□□□□ -0.79
VPS52-212ENST00000445902 FAM19A5Q7Z5A7 132 aaPredicted RBP10.11□□□□□ -0.79
VPS52-212ENST00000445902 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
VPS52-212ENST00000445902 COX7CP15954 63 aa10.1□□□□□ -0.79
VPS52-212ENST00000445902 PRIMA1Q86XR5 153 aa10.09□□□□□ -0.79
VPS52-212ENST00000445902 K7EQG2 157 aa10.09□□□□□ -0.79
VPS52-212ENST00000445902 LY6DQ14210 128 aa10.09□□□□□ -0.79
VPS52-212ENST00000445902 IGKV3D-7A0A0C4DH55 119 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 PEMTQ9UBM1 199 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 J3KT08 172 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
VPS52-212ENST00000445902 C5orf38Q86SI9 138 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 C2orf48Q96LS8 159 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 H3BUA1 57 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 K7EMT4 169 aa10.08□□□□□ -0.8
VPS52-212ENST00000445902 A0A087WVE0 104 aa10.06□□□□□ -0.8
VPS52-212ENST00000445902 TRACP01848 142 aa10.06□□□□□ -0.8
VPS52-212ENST00000445902 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
VPS52-212ENST00000445902 C14orf132Q9NPU4 83 aa10.06□□□□□ -0.8
VPS52-212ENST00000445902 KIR2DL5BQ8NHK3 375 aa10.06□□□□□ -0.8
VPS52-212ENST00000445902 A6NDX4 124 aa10.05□□□□□ -0.8
VPS52-212ENST00000445902 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
VPS52-212ENST00000445902 MALP21145 153 aa10.05□□□□□ -0.8
VPS52-212ENST00000445902 MUC6Q6W4X9 2439 aa10.05□□□□□ -0.8
VPS52-212ENST00000445902 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
VPS52-212ENST00000445902 CXCL5P42830 114 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 PIMREGQ9BSJ6 248 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 IGLV5-45A0A087WSX0 123 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 A0A1B0GX51 115 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 DNAL4O96015 105 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 CFHR3Q02985 330 aa10.04□□□□□ -0.8
VPS52-212ENST00000445902 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
VPS52-212ENST00000445902 IGLV5-39A0A0G2JS06 123 aa10.03□□□□□ -0.8
VPS52-212ENST00000445902 ATP5G1P05496 136 aa10.03□□□□□ -0.8
VPS52-212ENST00000445902 DEFB131AP59861 70 aa10.03□□□□□ -0.8
VPS52-212ENST00000445902 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
VPS52-212ENST00000445902 A0A087WYN8 130 aa10.02□□□□□ -0.8
VPS52-212ENST00000445902 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.8
VPS52-212ENST00000445902 ATOX1O00244 68 aa10.02□□□□□ -0.8
VPS52-212ENST00000445902 CRYGAP11844 174 aa10.02□□□□□ -0.81
VPS52-212ENST00000445902 RBMY1BA6NDE4 496 aaKnown RBP10.02□□□□□ -0.81
VPS52-212ENST00000445902 RBMY1EA6NEQ0 496 aaKnown RBP10.02□□□□□ -0.81
VPS52-212ENST00000445902 K7ENP7 123 aa10.02□□□□□ -0.81
VPS52-212ENST00000445902 RBMY1DP0C7P1 496 aaKnown RBP10.02□□□□□ -0.81
VPS52-212ENST00000445902 WNK1Q9H4A3 2382 aa10.02□□□□□ -0.81
VPS52-212ENST00000445902 LINC00337Q8N6G1 96 aa10.01□□□□□ -0.81
VPS52-212ENST00000445902 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
VPS52-212ENST00000445902 PSMB8P28062 276 aa10□□□□□ -0.81
VPS52-212ENST00000445902 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
VPS52-212ENST00000445902 LINC00846Q9NV44 126 aa10□□□□□ -0.81
VPS52-212ENST00000445902 CRPP02741 224 aa10□□□□□ -0.81
VPS52-212ENST00000445902 ZNF415Q09FC8 603 aa10□□□□□ -0.81
VPS52-212ENST00000445902 HIST2H2BCQ6DN03 193 aa10□□□□□ -0.81
VPS52-212ENST00000445902 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
VPS52-212ENST00000445902 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
VPS52-212ENST00000445902 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
VPS52-212ENST00000445902 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
VPS52-212ENST00000445902 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
VPS52-212ENST00000445902 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
VPS52-212ENST00000445902 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 NCR3O14931 201 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 SLPIP03973 132 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 DEFB136Q30KP8 78 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 Q96MF0 132 aa9.98□□□□□ -0.81
VPS52-212ENST00000445902 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
VPS52-212ENST00000445902 NCOR2Q9Y618 2525 aa9.97□□□□□ -0.81
VPS52-212ENST00000445902 IGKV2-28A0A075B6P5 120 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 OXTP01178 125 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 AVPP01185 164 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 IGKV2D-28P01615 120 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 IGHV4-59P01825 116 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 RNF152Q8N8N0 203 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.81
VPS52-212ENST00000445902 F5H768 121 aa9.96□□□□□ -0.82
VPS52-212ENST00000445902 LECT2O14960 151 aa9.96□□□□□ -0.82
VPS52-212ENST00000445902 RPL28P46779 137 aaKnown RBP9.96□□□□□ -0.82
VPS52-212ENST00000445902 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
VPS52-212ENST00000445902 OR13C6PQ8NH95 151 aa9.96□□□□□ -0.82
VPS52-212ENST00000445902 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
VPS52-212ENST00000445902 MYO9AB2RTY4 2548 aa9.95□□□□□ -0.82
VPS52-212ENST00000445902 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
VPS52-212ENST00000445902 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
VPS52-212ENST00000445902 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
VPS52-212ENST00000445902 USP9YO00507 2555 aaPredicted RBP9.94□□□□□ -0.82
VPS52-212ENST00000445902 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 C19orf84I3L1E1 186 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 SLURP1P55000 103 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 LINC00158P58513 81 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 SERP2Q8N6R1 65 aa9.94□□□□□ -0.82
VPS52-212ENST00000445902 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 HILS1P60008 231 aa9.93□□□□□ -0.82
VPS52-212ENST00000445902 PRORYQ9H606 182 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms