RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 OR5A1Q8NGJ0 315 aa15.8■□□□□ 0.12
C9orf3-207ENST00000445181 TCAPO15273 167 aa15.79■□□□□ 0.12
C9orf3-207ENST00000445181 APOC3P02656 99 aa15.79■□□□□ 0.12
C9orf3-207ENST00000445181 Q8N1X5 172 aa15.79■□□□□ 0.12
C9orf3-207ENST00000445181 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-207ENST00000445181 GCSHP23434 173 aa15.77■□□□□ 0.12
C9orf3-207ENST00000445181 SMAGPQ0VAQ4 97 aa15.77■□□□□ 0.12
C9orf3-207ENST00000445181 DGAT2L7PQ6IED9 249 aa15.77■□□□□ 0.12
C9orf3-207ENST00000445181 TMEM18Q96B42 140 aa15.77■□□□□ 0.12
C9orf3-207ENST00000445181 C14orf177Q52M58 125 aa15.76■□□□□ 0.11
C9orf3-207ENST00000445181 MRPL52Q86TS9 123 aaKnown RBP15.76■□□□□ 0.11
C9orf3-207ENST00000445181 LAMTOR2Q9Y2Q5 125 aa15.76■□□□□ 0.11
C9orf3-207ENST00000445181 APOBP04114 4563 aaKnown RBP15.76■□□□□ 0.11
C9orf3-207ENST00000445181 MAP1LC3AQ9H492 121 aa15.75■□□□□ 0.11
C9orf3-207ENST00000445181 LOC389332A0A1B0GUA5 103 aa15.74■□□□□ 0.11
C9orf3-207ENST00000445181 USP17L23D6RBM5 183 aa15.74■□□□□ 0.11
C9orf3-207ENST00000445181 RAB5AP20339 215 aa15.74■□□□□ 0.11
C9orf3-207ENST00000445181 KRTAP26-1Q6PEX3 210 aa15.74■□□□□ 0.11
C9orf3-207ENST00000445181 SVBPQ8N300 66 aa15.74■□□□□ 0.11
C9orf3-207ENST00000445181 SNAPINO95295 136 aa15.73■□□□□ 0.11
C9orf3-207ENST00000445181 KRTAP10-1P60331 282 aa15.73■□□□□ 0.11
C9orf3-207ENST00000445181 ZNF664Q8N3J9 261 aa15.72■□□□□ 0.11
C9orf3-207ENST00000445181 CDC42SE2Q9NRR3 84 aa15.72■□□□□ 0.11
C9orf3-207ENST00000445181 UBE2D4Q9Y2X8 147 aa15.71■□□□□ 0.11
C9orf3-207ENST00000445181 GAGE12HA6NDE8 117 aa15.7■□□□□ 0.1
C9orf3-207ENST00000445181 CHCHD10Q8WYQ3 142 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-207ENST00000445181 GNB1LQ9BYB4 327 aa15.7■□□□□ 0.1
C9orf3-207ENST00000445181 ABCA13Q86UQ4 5058 aa15.69■□□□□ 0.1
C9orf3-207ENST00000445181 PRSS47A8MTI9 375 aa15.69■□□□□ 0.1
C9orf3-207ENST00000445181 XGP55808 180 aa15.69■□□□□ 0.1
C9orf3-207ENST00000445181 RPL39P62891 51 aaKnown RBP15.69■□□□□ 0.1
C9orf3-207ENST00000445181 KIAA1644Q3SXP7 199 aa15.69■□□□□ 0.1
C9orf3-207ENST00000445181 COX19Q49B96 90 aa15.69■□□□□ 0.1
C9orf3-207ENST00000445181 CSDC2Q9Y534 153 aaKnown RBP15.69■□□□□ 0.1
C9orf3-207ENST00000445181 SS18Q15532 418 aa15.67■□□□□ 0.1
C9orf3-207ENST00000445181 Q8N8P6 123 aa15.67■□□□□ 0.1
C9orf3-207ENST00000445181 TIMM21Q9BVV7 248 aa15.67■□□□□ 0.1
C9orf3-207ENST00000445181 LINC00959A0A1B0GUT2 108 aa15.66■□□□□ 0.1
C9orf3-207ENST00000445181 XCL1P47992 114 aa15.66■□□□□ 0.1
C9orf3-207ENST00000445181 RNASE13Q5GAN3 156 aaKnown RBP15.66■□□□□ 0.1
C9orf3-207ENST00000445181 PRSS1P07477 247 aa15.65■□□□□ 0.1
C9orf3-207ENST00000445181 CCL25O15444 150 aa15.64■□□□□ 0.09
C9orf3-207ENST00000445181 MT-ND6P03923 174 aa15.64■□□□□ 0.09
C9orf3-207ENST00000445181 Q6ZUT4 128 aa15.64■□□□□ 0.09
C9orf3-207ENST00000445181 SPANXA1Q9NS26 97 aa15.64■□□□□ 0.09
C9orf3-207ENST00000445181 TGIF2-C20orf24A0A0A6YYL0 155 aa15.63■□□□□ 0.09
C9orf3-207ENST00000445181 hDV102S1A0JD36 115 aa15.63■□□□□ 0.09
C9orf3-207ENST00000445181 EPM2AB3EWF7 344 aa15.63■□□□□ 0.09
C9orf3-207ENST00000445181 MRPL18Q9H0U6 180 aaKnown RBP15.63■□□□□ 0.09
C9orf3-207ENST00000445181 NXT2Q9NPJ8 142 aaKnown RBP15.63■□□□□ 0.09
C9orf3-207ENST00000445181 FABP9Q0Z7S8 132 aa15.62■□□□□ 0.09
C9orf3-207ENST00000445181 LINC01620Q4KN68 170 aa15.62■□□□□ 0.09
C9orf3-207ENST00000445181 CFAP161Q6P656 301 aa15.62■□□□□ 0.09
C9orf3-207ENST00000445181 SLC7A5P1Q8MH63 180 aa15.62■□□□□ 0.09
C9orf3-207ENST00000445181 IFI27P40305 119 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-207ENST00000445181 ORMDL2Q53FV1 153 aa15.61■□□□□ 0.09
C9orf3-207ENST00000445181 TRAV13-1A0A0B4J241 112 aa15.6■□□□□ 0.09
C9orf3-207ENST00000445181 C1orf196B1AJZ1 125 aa15.6■□□□□ 0.09
C9orf3-207ENST00000445181 FOXI1Q12951 378 aa15.6■□□□□ 0.09
C9orf3-207ENST00000445181 K7EMI3 77 aa15.59■□□□□ 0.09
C9orf3-207ENST00000445181 OPRPNQ99935 248 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-207ENST00000445181 AP5S1Q9NUS5 200 aa15.59■□□□□ 0.09
C9orf3-207ENST00000445181 CD164L2Q6UWJ8 174 aa15.58■□□□□ 0.08
C9orf3-207ENST00000445181 PRSS3P2Q8NHM4 247 aa15.58■□□□□ 0.08
C9orf3-207ENST00000445181 ALKBH7Q9BT30 221 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-207ENST00000445181 CYSLTR1Q9Y271 337 aa15.58■□□□□ 0.08
C9orf3-207ENST00000445181 MRPS36P82909 103 aaKnown RBP15.57■□□□□ 0.08
C9orf3-207ENST00000445181 C15orf56Q8N910 161 aa15.57■□□□□ 0.08
C9orf3-207ENST00000445181 TRAPPC1Q9Y5R8 145 aa15.57■□□□□ 0.08
C9orf3-207ENST00000445181 HIGD2BQ4VC39 106 aa15.56■□□□□ 0.08
C9orf3-207ENST00000445181 C2orf66Q6UXQ4 117 aa15.56■□□□□ 0.08
C9orf3-207ENST00000445181 DNAH8Q96JB1 4490 aa15.56■□□□□ 0.08
C9orf3-207ENST00000445181 HAMPP81172 84 aa15.55■□□□□ 0.08
C9orf3-207ENST00000445181 PYGO1Q9Y3Y4 419 aa15.55■□□□□ 0.08
C9orf3-207ENST00000445181 IFITM10A6NMD0 228 aa15.54■□□□□ 0.08
C9orf3-207ENST00000445181 SMR3BP02814 79 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-207ENST00000445181 FAM104AQ969W3 186 aa15.54■□□□□ 0.08
C9orf3-207ENST00000445181 FAM30AQ9NZY2 134 aa15.54■□□□□ 0.08
C9orf3-207ENST00000445181 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-207ENST00000445181 G0S2P27469 103 aa15.53■□□□□ 0.08
C9orf3-207ENST00000445181 Q5VSD8 79 aa15.53■□□□□ 0.08
C9orf3-207ENST00000445181 IGLV4-3A0A075B6K6 122 aa15.52■□□□□ 0.08
C9orf3-207ENST00000445181 MALP21145 153 aa15.52■□□□□ 0.08
C9orf3-207ENST00000445181 CNBPP62633 177 aaKnown RBP15.52■□□□□ 0.08
C9orf3-207ENST00000445181 TMEM141Q96I45 108 aa15.52■□□□□ 0.08
C9orf3-207ENST00000445181 IGHV1-58A0A0C4DH39 117 aa15.51■□□□□ 0.07
C9orf3-207ENST00000445181 COX7A2LO14548 114 aa15.51■□□□□ 0.07
C9orf3-207ENST00000445181 C9orf163Q8N9P6 203 aa15.51■□□□□ 0.07
C9orf3-207ENST00000445181 GVQW2A0A096LPI5 108 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-207ENST00000445181 Q6ZN92 141 aa15.5■□□□□ 0.07
C9orf3-207ENST00000445181 FA2HQ7L5A8 372 aa15.5■□□□□ 0.07
C9orf3-207ENST00000445181 SMCO4Q9NRQ5 59 aa15.5■□□□□ 0.07
C9orf3-207ENST00000445181 TEX43Q6ZNM6 134 aa15.49■□□□□ 0.07
C9orf3-207ENST00000445181 CBLN2Q8IUK8 224 aa15.49■□□□□ 0.07
C9orf3-207ENST00000445181 SLPIP03973 132 aa15.48■□□□□ 0.07
C9orf3-207ENST00000445181 INAFM2P0DMQ5 153 aa15.48■□□□□ 0.07
C9orf3-207ENST00000445181 Q6ZSA8 131 aa15.48■□□□□ 0.07
C9orf3-207ENST00000445181 C5orf38Q86SI9 138 aa15.48■□□□□ 0.07
C9orf3-207ENST00000445181 C2orf88Q9BSF0 95 aa15.48■□□□□ 0.07
C9orf3-207ENST00000445181 TOMM6Q96B49 74 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms