RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RMI2Q96E14 147 aa10.61□□□□□ -0.71
USP39-205ENST00000442708 HERC2O95714 4834 aa10.61□□□□□ -0.71
USP39-205ENST00000442708 IGLV10-54A0A075B6I4 117 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 RAB5AP20339 215 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 C1orf43Q9BWL3 253 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 PKHD1P08F94 4074 aa10.6□□□□□ -0.71
USP39-205ENST00000442708 IGKV3OR2-268A0A0C4DH90 116 aa10.59□□□□□ -0.71
USP39-205ENST00000442708 LECT2O14960 151 aa10.59□□□□□ -0.71
USP39-205ENST00000442708 SPATA12Q7Z6I5 190 aa10.59□□□□□ -0.71
USP39-205ENST00000442708 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
USP39-205ENST00000442708 NXT2Q9NPJ8 142 aaKnown RBP10.59□□□□□ -0.71
USP39-205ENST00000442708 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
USP39-205ENST00000442708 SCO1O75880 301 aa10.58□□□□□ -0.72
USP39-205ENST00000442708 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
USP39-205ENST00000442708 ZNF664Q8N3J9 261 aa10.58□□□□□ -0.72
USP39-205ENST00000442708 OPRPNQ99935 248 aaPredicted RBP10.58□□□□□ -0.72
USP39-205ENST00000442708 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
USP39-205ENST00000442708 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
USP39-205ENST00000442708 Q6ZUT4 128 aa10.57□□□□□ -0.72
USP39-205ENST00000442708 TRAV8-4A0A0B4J246 113 aa10.56□□□□□ -0.72
USP39-205ENST00000442708 TMEM18Q96B42 140 aa10.56□□□□□ -0.72
USP39-205ENST00000442708 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
USP39-205ENST00000442708 LINC00959A0A1B0GUT2 108 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 COLCA2A8K830 154 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 Q8N814 137 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 PRSS3P2Q8NHM4 247 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 C18orf32Q8TCD1 76 aa10.55□□□□□ -0.72
USP39-205ENST00000442708 K7EMI3 77 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 EREGO14944 169 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 ORMDL2Q53FV1 153 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
USP39-205ENST00000442708 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
USP39-205ENST00000442708 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
USP39-205ENST00000442708 DYNC1H1Q14204 4646 aaKnown RBP10.53□□□□□ -0.72
USP39-205ENST00000442708 USP17L23D6RBM5 183 aa10.52□□□□□ -0.73
USP39-205ENST00000442708 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
USP39-205ENST00000442708 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
USP39-205ENST00000442708 CYSLTR1Q9Y271 337 aa10.52□□□□□ -0.73
USP39-205ENST00000442708 PYGO1Q9Y3Y4 419 aa10.52□□□□□ -0.73
USP39-205ENST00000442708 IGLV4-3A0A075B6K6 122 aa10.51□□□□□ -0.73
USP39-205ENST00000442708 CCL25O15444 150 aa10.51□□□□□ -0.73
USP39-205ENST00000442708 TRGC2P03986 189 aa10.51□□□□□ -0.73
USP39-205ENST00000442708 FOXI1Q12951 378 aa10.51□□□□□ -0.73
USP39-205ENST00000442708 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 C16orf90A8MZG2 172 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 XCL1P47992 114 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 ZC2HC1BQ5TFG8 222 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
USP39-205ENST00000442708 DNAH5Q8TE73 4624 aa10.49□□□□□ -0.73
USP39-205ENST00000442708 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.49□□□□□ -0.73
USP39-205ENST00000442708 TRAV13-1A0A0B4J241 112 aa10.49□□□□□ -0.73
USP39-205ENST00000442708 A0A096LNJ9 63 aa10.48□□□□□ -0.73
USP39-205ENST00000442708 PRSS1P07477 247 aa10.48□□□□□ -0.73
USP39-205ENST00000442708 SS18Q15532 418 aa10.48□□□□□ -0.73
USP39-205ENST00000442708 LINC00173Q6ZV60 143 aa10.48□□□□□ -0.73
USP39-205ENST00000442708 NTN5Q8WTR8 489 aaPredicted RBP10.48□□□□□ -0.73
USP39-205ENST00000442708 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
USP39-205ENST00000442708 LINC00614P0C842 121 aa10.47□□□□□ -0.73
USP39-205ENST00000442708 CDPF1Q6NVV7 123 aa10.47□□□□□ -0.73
USP39-205ENST00000442708 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
USP39-205ENST00000442708 TMEM141Q96I45 108 aa10.47□□□□□ -0.73
USP39-205ENST00000442708 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 IFITM10A6NMD0 228 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 C1orf196B1AJZ1 125 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 PMCHL1Q16048 86 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.73
USP39-205ENST00000442708 KRTAP10-1P60331 282 aa10.45□□□□□ -0.74
USP39-205ENST00000442708 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
USP39-205ENST00000442708 AMELXQ99217 191 aa10.45□□□□□ -0.74
USP39-205ENST00000442708 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 G0S2P27469 103 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 C14orf177Q52M58 125 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 ERASQ7Z444 233 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
USP39-205ENST00000442708 RYR1P21817 5038 aa10.43□□□□□ -0.74
USP39-205ENST00000442708 NPSP0C0P6 89 aa10.43□□□□□ -0.74
USP39-205ENST00000442708 TEX43Q6ZNM6 134 aa10.43□□□□□ -0.74
USP39-205ENST00000442708 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
USP39-205ENST00000442708 SLPIP03973 132 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 S100A1P23297 94 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 GCSHP23434 173 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 UBE2D1P51668 147 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 LINC00310P59036 64 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 COX6A2Q02221 97 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 LINC00242Q5T6M2 205 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 VCX2Q9H322 139 aa10.42□□□□□ -0.74
USP39-205ENST00000442708 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
USP39-205ENST00000442708 RAB5BP61020 215 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 409.3 ms