RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PPP1R2P9O14990 202 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 SNAI2O43623 268 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 MT-ND6P03923 174 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 SMIM17P0DL12 118 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 ANAPC16Q96DE5 110 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
LINC00642-202ENST00000442515 M0QY20 66 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 LTAP01374 205 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 SSTP61278 116 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 C1orf137Q5JT78 98 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 CBLN2Q8IUK8 224 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 AP1S3Q96PC3 154 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
LINC00642-202ENST00000442515 BIN3Q9NQY0 253 aa8.43□□□□□ -1.06
LINC00642-202ENST00000442515 CXCL1P09341 107 aa8.42□□□□□ -1.06
LINC00642-202ENST00000442515 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
LINC00642-202ENST00000442515 BAGE2Q86Y30 109 aa8.42□□□□□ -1.06
LINC00642-202ENST00000442515 FER1L6-AS1Q8NA97 138 aa8.42□□□□□ -1.06
LINC00642-202ENST00000442515 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
LINC00642-202ENST00000442515 A0A1W2PNN7 141 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 K7EN84 100 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 MGPP08493 103 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 OR5AL1P0C617 328 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 FOXI1Q12951 378 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 PGLYRP4Q96LB8 373 aa8.41□□□□□ -1.06
LINC00642-202ENST00000442515 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 GAGE2BQ13066 116 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 FAM231DQ6ZW35 169 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 IMMP2LQ96T52 175 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
LINC00642-202ENST00000442515 AMTP48728 403 aa8.39□□□□□ -1.07
LINC00642-202ENST00000442515 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
LINC00642-202ENST00000442515 H0Y9J4 135 aa8.38□□□□□ -1.07
LINC00642-202ENST00000442515 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
LINC00642-202ENST00000442515 S100PP25815 95 aa8.38□□□□□ -1.07
LINC00642-202ENST00000442515 BTF3L4Q96K17 158 aa8.38□□□□□ -1.07
LINC00642-202ENST00000442515 TRAV9-1A0A075B6T8 112 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 COLCA2A8K830 154 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 SYCNQ0VAF6 134 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 COTL1Q14019 142 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
LINC00642-202ENST00000442515 PHF5AQ7RTV0 110 aaKnown RBP8.37□□□□□ -1.07
LINC00642-202ENST00000442515 CRCT1Q9UGL9 99 aa8.37□□□□□ -1.07
LINC00642-202ENST00000442515 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
LINC00642-202ENST00000442515 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
LINC00642-202ENST00000442515 XCL1P47992 114 aa8.36□□□□□ -1.07
LINC00642-202ENST00000442515 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
LINC00642-202ENST00000442515 V9GYV3 84 aa8.36□□□□□ -1.07
LINC00642-202ENST00000442515 C19orf71A6NCJ1 209 aa8.35□□□□□ -1.07
LINC00642-202ENST00000442515 UBE2D1P51668 147 aa8.35□□□□□ -1.07
LINC00642-202ENST00000442515 CT83Q5H943 113 aa8.35□□□□□ -1.07
LINC00642-202ENST00000442515 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
LINC00642-202ENST00000442515 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
LINC00642-202ENST00000442515 AMMECR1LQ6DCA0 310 aa8.34□□□□□ -1.07
LINC00642-202ENST00000442515 RNASEKQ6P5S7 137 aaKnown RBP8.34□□□□□ -1.07
LINC00642-202ENST00000442515 RNASE7Q9H1E1 156 aaKnown RBP8.34□□□□□ -1.07
LINC00642-202ENST00000442515 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
LINC00642-202ENST00000442515 RAB5AP20339 215 aa8.33□□□□□ -1.08
LINC00642-202ENST00000442515 CAMPP49913 170 aa8.33□□□□□ -1.08
LINC00642-202ENST00000442515 NUDT10Q8NFP7 164 aa8.33□□□□□ -1.08
LINC00642-202ENST00000442515 NUDT11Q96G61 164 aa8.33□□□□□ -1.08
LINC00642-202ENST00000442515 RPP21Q9H633 154 aaKnown RBP8.33□□□□□ -1.08
LINC00642-202ENST00000442515 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.32□□□□□ -1.08
LINC00642-202ENST00000442515 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
LINC00642-202ENST00000442515 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
LINC00642-202ENST00000442515 IGKV2-29A2NJV5 120 aaPredicted RBP8.32□□□□□ -1.08
LINC00642-202ENST00000442515 CCL25O15444 150 aa8.32□□□□□ -1.08
LINC00642-202ENST00000442515 FGF6P10767 208 aa8.32□□□□□ -1.08
LINC00642-202ENST00000442515 RPL13AP40429 203 aaKnown RBP8.32□□□□□ -1.08
LINC00642-202ENST00000442515 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
LINC00642-202ENST00000442515 A8MWL6 223 aa8.31□□□□□ -1.08
LINC00642-202ENST00000442515 APOMO95445 188 aa8.31□□□□□ -1.08
LINC00642-202ENST00000442515 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
LINC00642-202ENST00000442515 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
LINC00642-202ENST00000442515 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 A0A087WZ39 114 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.3□□□□□ -1.08
LINC00642-202ENST00000442515 NTF3P20783 257 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
LINC00642-202ENST00000442515 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
LINC00642-202ENST00000442515 XKRY2A2RUG3 117 aa8.29□□□□□ -1.08
LINC00642-202ENST00000442515 TSPAN13O95857 204 aa8.29□□□□□ -1.08
LINC00642-202ENST00000442515 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
LINC00642-202ENST00000442515 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
LINC00642-202ENST00000442515 COX19Q49B96 90 aa8.29□□□□□ -1.08
LINC00642-202ENST00000442515 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
LINC00642-202ENST00000442515 ATP5L2Q7Z4Y8 100 aa8.28□□□□□ -1.08
LINC00642-202ENST00000442515 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
LINC00642-202ENST00000442515 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
LINC00642-202ENST00000442515 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
LINC00642-202ENST00000442515 H7C423 109 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms