RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	CNFN	Q9BYD5	112 aa		10.23	□□□□□ -0.77
LAMB1-205	ENST00000439976	TRBV25-1	A0A075B6N4	114 aa		10.22	□□□□□ -0.77
LAMB1-205	ENST00000439976	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.22	□□□□□ -0.77
LAMB1-205	ENST00000439976	HBB	P68871	147 aa		10.22	□□□□□ -0.77
LAMB1-205	ENST00000439976	SMIM15	Q7Z3B0	74 aa		10.22	□□□□□ -0.77
LAMB1-205	ENST00000439976	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.22	□□□□□ -0.77
LAMB1-205	ENST00000439976	COLCA2	A8K830	154 aa		10.21	□□□□□ -0.77
LAMB1-205	ENST00000439976	NTF3	P20783	257 aa		10.21	□□□□□ -0.77
LAMB1-205	ENST00000439976	TWIST1	Q15672	202 aa		10.21	□□□□□ -0.77
LAMB1-205	ENST00000439976	MRPL54	Q6P161	138 aa	Known RBP	10.21	□□□□□ -0.77
LAMB1-205	ENST00000439976	IGLV4-60	A0A075B6I1	120 aa		10.2	□□□□□ -0.78
LAMB1-205	ENST00000439976		F5H697	171 aa		10.2	□□□□□ -0.78
LAMB1-205	ENST00000439976	TRAV8-4	A0A0B4J246	113 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	IGHV1-24	A0A0C4DH33	117 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976		A0A1B0GXF2	115 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	MT-ND6	P03923	174 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	TRGC1	P0CF51	173 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	DPH3	Q96FX2	82 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	GNB1L	Q9BYB4	327 aa		10.19	□□□□□ -0.78
LAMB1-205	ENST00000439976	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976		A0A1B0GUV1	79 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976		M0QY20	66 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	RAB5A	P20339	215 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	CAMP	P49913	170 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	SST	P61278	116 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	C15orf56	Q8N910	161 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	AP5S1	Q9NUS5	200 aa		10.18	□□□□□ -0.78
LAMB1-205	ENST00000439976	PRR3	P79522	188 aa	Known RBP	10.17	□□□□□ -0.78
LAMB1-205	ENST00000439976	AP1S3	Q96PC3	154 aa		10.17	□□□□□ -0.78
LAMB1-205	ENST00000439976	SMIM17	P0DL12	118 aa		10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976	RPS10	P46783	165 aa	Known RBP	10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976	KRTAP10-8	P60410	259 aa		10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976	COX6A2	Q02221	97 aa		10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976	C7orf33	Q8WU49	177 aa		10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976	TMEM191A	Q9H0A3	160 aa		10.16	□□□□□ -0.78
LAMB1-205	ENST00000439976		A0A0J9YXV3	536 aa		10.15	□□□□□ -0.78
LAMB1-205	ENST00000439976	GATD1	Q8NB37	220 aa		10.15	□□□□□ -0.78
LAMB1-205	ENST00000439976	PRSS3P2	Q8NHM4	247 aa		10.15	□□□□□ -0.78
LAMB1-205	ENST00000439976	DPH3P1	Q9H4G8	78 aa		10.15	□□□□□ -0.78
LAMB1-205	ENST00000439976	TRAPPC1	Q9Y5R8	145 aa		10.15	□□□□□ -0.78
LAMB1-205	ENST00000439976	SUMO4	Q6EEV6	95 aa		10.14	□□□□□ -0.79
LAMB1-205	ENST00000439976	TMEM136	Q6ZRR5	245 aa		10.14	□□□□□ -0.79
LAMB1-205	ENST00000439976	TMEM243	Q9BU79	118 aa		10.14	□□□□□ -0.79
LAMB1-205	ENST00000439976	LPA	P08519	4548 aa		10.14	□□□□□ -0.79
LAMB1-205	ENST00000439976	APCS	P02743	223 aa		10.13	□□□□□ -0.79
LAMB1-205	ENST00000439976	FABP9	Q0Z7S8	132 aa		10.12	□□□□□ -0.79
LAMB1-205	ENST00000439976	MAJIN	Q3KP22	176 aa		10.12	□□□□□ -0.79
LAMB1-205	ENST00000439976	FAM104B	Q5XKR9	115 aa		10.12	□□□□□ -0.79
LAMB1-205	ENST00000439976	MRPL18	Q9H0U6	180 aa	Known RBP	10.12	□□□□□ -0.79
LAMB1-205	ENST00000439976	IGKV2-24	A0A0C4DH68	120 aa		10.11	□□□□□ -0.79
LAMB1-205	ENST00000439976	GAGE12H	A6NDE8	117 aa		10.11	□□□□□ -0.79
LAMB1-205	ENST00000439976	MGP	P08493	103 aa		10.11	□□□□□ -0.79
LAMB1-205	ENST00000439976	PPBP	P02775	128 aa		10.1	□□□□□ -0.79
LAMB1-205	ENST00000439976	HIGD2B	Q4VC39	106 aa		10.1	□□□□□ -0.79
LAMB1-205	ENST00000439976	STPG4	Q8N801	248 aa		10.1	□□□□□ -0.79
LAMB1-205	ENST00000439976		A0A096LNI7	61 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	C1orf196	B1AJZ1	125 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976		H7C1H1	209 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	TRGC2	P03986	189 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	RAB4A	P20338	218 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	SPINK6	Q6UWN8	80 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	AMN1	Q8IY45	258 aa		10.09	□□□□□ -0.79
LAMB1-205	ENST00000439976	GAS8-AS1	O95177	125 aa		10.08	□□□□□ -0.8
LAMB1-205	ENST00000439976	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.08	□□□□□ -0.8	2e-11	■□□□□ 8.9
LAMB1-205	ENST00000439976	MRAP2	Q96G30	205 aa		10.08	□□□□□ -0.8
LAMB1-205	ENST00000439976	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	PPP1R17	O96001	155 aa		10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	CKS2	P33552	79 aa		10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	MRPL51	Q4U2R6	128 aa	Known RBP	10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	CFAP161	Q6P656	301 aa		10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	ORMDL3	Q8N138	153 aa		10.07	□□□□□ -0.8
LAMB1-205	ENST00000439976	NIT2	Q9NQR4	276 aa		10.06	□□□□□ -0.8
LAMB1-205	ENST00000439976	LAMTOR2	Q9Y2Q5	125 aa		10.06	□□□□□ -0.8
LAMB1-205	ENST00000439976	UBE2L6	O14933	153 aa		10.05	□□□□□ -0.8
LAMB1-205	ENST00000439976	AMT	P48728	403 aa		10.05	□□□□□ -0.8
LAMB1-205	ENST00000439976	RAB5B	P61020	215 aa		10.05	□□□□□ -0.8
LAMB1-205	ENST00000439976	REG3G	Q6UW15	175 aa		10.05	□□□□□ -0.8
LAMB1-205	ENST00000439976	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.05	□□□□□ -0.8
LAMB1-205	ENST00000439976	IGKV3OR2-268	A0A0C4DH90	116 aa		10.04	□□□□□ -0.8
LAMB1-205	ENST00000439976		D6R8Y8	96 aa		10.04	□□□□□ -0.8
LAMB1-205	ENST00000439976	KIAA1644	Q3SXP7	199 aa		10.04	□□□□□ -0.8
LAMB1-205	ENST00000439976	PRELID3A	Q96N28	172 aa		10.04	□□□□□ -0.8
LAMB1-205	ENST00000439976	FOXI1	Q12951	378 aa		10.03	□□□□□ -0.8
LAMB1-205	ENST00000439976	COTL1	Q14019	142 aa		10.03	□□□□□ -0.8
LAMB1-205	ENST00000439976	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.03	□□□□□ -0.8
LAMB1-205	ENST00000439976	TRAV26-2	A0A0B4J265	109 aa		10.01	□□□□□ -0.81
LAMB1-205	ENST00000439976	SMKR1	H3BMG3	65 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	TNFRSF6B	O95407	300 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976		Q6ZRP5	223 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	LINC00526	Q96FQ7	95 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	C20orf78	Q9BR46	151 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	MAP1LC3A	Q9H492	121 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	LINC00474	Q9P2X8	69 aa		10	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BK	O60814	126 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	NCR2	O95944	276 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BJ	P06899	126 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BO	P23527	126 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BB	P33778	126 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BD	P58876	126 aa		9.99	□□□□□ -0.81
LAMB1-205	ENST00000439976	HIST1H2BC	P62807	126 aa		9.99	□□□□□ -0.81

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