RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 C11orf45Q8TAV5 145 aa4.82□□□□□ -1.64
BDNF-211ENST00000439476 SONP18583 2426 aaKnown RBP4.81□□□□□ -1.64
BDNF-211ENST00000439476 LGALS9O00182 355 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 CAMK2N2Q96S95 79 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 OXTP01178 125 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 IGHV4-59P01825 116 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
BDNF-211ENST00000439476 NREPQ16612 68 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 MIAQ16674 131 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 A0A0J9YX75 114 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 J3QKU1 62 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 CUL9Q8IWT3 2517 aa4.81□□□□□ -1.64
BDNF-211ENST00000439476 NDUFA11Q86Y39 141 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
BDNF-211ENST00000439476 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 GYPEP15421 78 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 DEFB1P60022 68 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 DEFB113Q30KQ7 82 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 CELSR3Q9NYQ7 3312 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 CSPG4Q6UVK1 2322 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 CACNA1AO00555 2505 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 C4orf3Q8WVX3 66 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 ARHGAP32A7KAX9 2087 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 CCL18P55774 89 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 UBE2BP63146 152 aa4.8□□□□□ -1.64
BDNF-211ENST00000439476 IGHV4-61A0A0C4DH41 118 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 TEX49A0A1B0GTD5 131 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 IGKV2D-24A0A075B6R9 120 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 A0A096LNJ9 63 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 ODF3BA8MYP8 253 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 IGF1P05019 195 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 CRYGAP11844 174 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 EBI3Q14213 229 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 RNASE13Q5GAN3 156 aaKnown RBP4.79□□□□□ -1.64
BDNF-211ENST00000439476 SMAD5-AS1Q9Y6J3 95 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 TLN1Q9Y490 2541 aaKnown RBP4.79□□□□□ -1.64
BDNF-211ENST00000439476 TNRC6BQ9UPQ9 1833 aaKnown RBP4.79□□□□□ -1.64
BDNF-211ENST00000439476 TIMM17BO60830 172 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 P0DMU3 169 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 FAM231AP0DMU4 169 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 FAM231CP0DMU5 169 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 PRO0255Q9UI72 69 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 PKD1L2Q7Z442 2459 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 C2CD3Q4AC94 2353 aa4.79□□□□□ -1.64
BDNF-211ENST00000439476 A6NDX4 124 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 LY6LH3BQJ8 138 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 NEXN-AS1Q8NBZ9 246 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 SORL1Q92673 2214 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
BDNF-211ENST00000439476 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 ZFP36P26651 326 aaKnown RBP4.77□□□□□ -1.65
BDNF-211ENST00000439476 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
BDNF-211ENST00000439476 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 LECT2O14960 151 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 SPAG11BQ08648 103 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 NRACQ8N912 160 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 Q9UF83 564 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 PTPRQQ9UMZ3 2332 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 TRBV30A0A0K0K1B3 111 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 MRPS12O15235 138 aaKnown RBP4.77□□□□□ -1.65
BDNF-211ENST00000439476 SLURP1P55000 103 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 NCOR2Q9Y618 2525 aa4.77□□□□□ -1.65
BDNF-211ENST00000439476 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 A0A087WW49 117 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 IBA57-AS1B1ANH7 110 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 BLCAPP62952 87 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 UNQ9165/PRO28630Q6UXU0 137 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 IGHV4-38-2P0DP08 117 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 CNFNQ9BYD5 112 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 ZFAND3Q9H8U3 227 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 A0A0J9YY99 117 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 MIR7-3HGQ8N6C7 128 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 IGHV4-30-2A0A087WSY4 118 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 NDUFC1O43677 76 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 COX7BP24311 80 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
BDNF-211ENST00000439476 AGRNO00468 2067 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 FAM208BQ5VWN6 2430 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 ACACBO00763 2458 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 LYRM9A8MSI8 78 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 K7EQG2 157 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 TRBV12-3P01733 135 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 CLPSL1A2RUU4 121 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 Q8NA96 180 aa4.75□□□□□ -1.65
BDNF-211ENST00000439476 IGHV4-4A0A075B6R2 117 aa4.74□□□□□ -1.65
BDNF-211ENST00000439476 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms