RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 NDUFA4O00483 81 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 SAA4P35542 130 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 DEFB121Q5J5C9 76 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 BRD3OSQ6XYD6 125 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 C5orf56Q8N8D9 126 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 SPXQ9BT56 116 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
HPS4-206ENST00000439453 ADAMTSL4-AS1Q5T5F5 129 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 MDFIQ99750 246 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 TRBV7-7A0A0K0K1E9 115 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 SPANXCQ9NY87 97 aa6.3□□□□□ -1.4
HPS4-206ENST00000439453 ATRQ13535 2644 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 LST1O00453 97 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 KRTAP24-1Q3LI83 254 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 C19orf54Q5BKX5 351 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 Q6ZSV7 163 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 IGKV3-20P01619 116 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 HILS1P60008 231 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 I3L3M4 83 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 C9orf85Q96MD7 179 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 LINC01587Q99440 93 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
HPS4-206ENST00000439453 TRGV11A0A075B6L2 103 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 IGHV3-16A0A0C4DH30 117 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 DNAL4O96015 105 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 MIAQ16674 131 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 OR13C6PQ8NH95 151 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 RHPN1-AS1Q9BWJ2 59 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 BRI3O95415 125 aa6.28□□□□□ -1.4
HPS4-206ENST00000439453 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 DNAJC9-AS1A6NH13 148 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 NPFFO15130 113 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 IGHV3-11P01762 117 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 Q6YL49 198 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 CD28P10747 220 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
HPS4-206ENST00000439453 TMEM61Q8N0U2 210 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 MOB4Q9Y3A3 225 aa6.27□□□□□ -1.41
HPS4-206ENST00000439453 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 GAGE2AQ6NT46 116 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 VPREB3Q9UKI3 123 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 PYGO1Q9Y3Y4 419 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 ID1P41134 155 aa6.26□□□□□ -1.41
HPS4-206ENST00000439453 A8MZ25 164 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.25□□□□□ -1.41
HPS4-206ENST00000439453 DUX5Q96PT3 197 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 IMUPQ9GZP8 106 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 DNAH3Q8TD57 4116 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 TRAV12-2A0A075B6T6 113 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 IGHV4-59P01825 116 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 ACYP1P07311 99 aa6.25□□□□□ -1.41
HPS4-206ENST00000439453 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
HPS4-206ENST00000439453 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
HPS4-206ENST00000439453 NACAE9PAV3 2078 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 RS1O15537 224 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
HPS4-206ENST00000439453 USMG5Q96IX5 58 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 EDN2P20800 178 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
HPS4-206ENST00000439453 STAB1Q9NY15 2570 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
HPS4-206ENST00000439453 IGHV1OR15-1A0A075B7D0 117 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 TINCRA0A1B0GVN0 87 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 TIMM17BO60830 172 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 PF4V1P10720 104 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 DAND5Q8N907 189 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 VWFP04275 2813 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 SMCR5Q8TEV8 140 aa6.23□□□□□ -1.41
HPS4-206ENST00000439453 CITED2Q99967 270 aaPredicted RBP6.23□□□□□ -1.41
HPS4-206ENST00000439453 SORL1Q92673 2214 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 TMEM86BQ8N661 226 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
HPS4-206ENST00000439453 PKD1L1Q8TDX9 2849 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 H3BUA1 57 aa6.22□□□□□ -1.41
HPS4-206ENST00000439453 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
HPS4-206ENST00000439453 TMEM89A2RUT3 159 aa6.21□□□□□ -1.41
HPS4-206ENST00000439453 LINC00694P0DN24 101 aa6.21□□□□□ -1.41
HPS4-206ENST00000439453 COPS9Q8WXC6 57 aa6.21□□□□□ -1.41
HPS4-206ENST00000439453 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
HPS4-206ENST00000439453 NDUFA7O95182 113 aa6.21□□□□□ -1.42
HPS4-206ENST00000439453 SPINK13Q1W4C9 94 aa6.21□□□□□ -1.42
HPS4-206ENST00000439453 WNK1Q9H4A3 2382 aa6.21□□□□□ -1.42
HPS4-206ENST00000439453 COX7A2LO14548 114 aa6.21□□□□□ -1.42
HPS4-206ENST00000439453 UQCRQO14949 82 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms