RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SPINK13Q1W4C9 94 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 LENEPQ9Y5L5 61 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 TSHBP01222 138 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 MAPK1IP1LQ8NDC0 245 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 DCHS2Q6V1P9 2916 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 EIF4EBP3O60516 100 aaPredicted RBP11.73□□□□□ -0.53
DHFR-201ENST00000439211 SEC61GP60059 68 aa11.73□□□□□ -0.53
DHFR-201ENST00000439211 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
DHFR-201ENST00000439211 FAM236DA0A1B0GTK5 79 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 RNASE1P07998 156 aaKnown RBP11.71□□□□□ -0.53
DHFR-201ENST00000439211 FAM236CP0DP71 79 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 MIAQ16674 131 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 SUMO4Q6EEV6 95 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 LRRK2Q5S007 2527 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 GHRHP01286 108 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 TMEM61Q8N0U2 210 aa11.71□□□□□ -0.53
DHFR-201ENST00000439211 A8MZ25 164 aa11.71□□□□□ -0.54
DHFR-201ENST00000439211 C14orf132Q9NPU4 83 aa11.71□□□□□ -0.54
DHFR-201ENST00000439211 RBM3P98179 157 aaKnown RBP11.7□□□□□ -0.54
DHFR-201ENST00000439211 TRAV23DV6A0A075B6W5 121 aa11.7□□□□□ -0.54
DHFR-201ENST00000439211 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
DHFR-201ENST00000439211 COX7A2LO14548 114 aa11.69□□□□□ -0.54
DHFR-201ENST00000439211 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
DHFR-201ENST00000439211 EDN2P20800 178 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 PRIMA1Q86XR5 153 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 ITLN2Q8WWU7 325 aaPredicted RBP11.68□□□□□ -0.54
DHFR-201ENST00000439211 C1orf195Q5TG92 126 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 KNCNA6PVL3 124 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 MSMBP08118 114 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
DHFR-201ENST00000439211 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
DHFR-201ENST00000439211 CYSTM1Q9H1C7 97 aa11.67□□□□□ -0.54
DHFR-201ENST00000439211 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
DHFR-201ENST00000439211 U3KQE9 123 aa11.67□□□□□ -0.54
DHFR-201ENST00000439211 IGHG2P01859 326 aa11.67□□□□□ -0.54
DHFR-201ENST00000439211 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
DHFR-201ENST00000439211 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 PSMG3-AS1Q96PY0 264 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 SOCS3O14543 225 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 AMELXQ99217 191 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
DHFR-201ENST00000439211 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.54
DHFR-201ENST00000439211 C10orf99Q6UWK7 81 aa11.65□□□□□ -0.55
DHFR-201ENST00000439211 C5orf38Q86SI9 138 aa11.65□□□□□ -0.55
DHFR-201ENST00000439211 C2orf48Q96LS8 159 aa11.65□□□□□ -0.55
DHFR-201ENST00000439211 F8WDY8 70 aa11.64□□□□□ -0.55
DHFR-201ENST00000439211 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
DHFR-201ENST00000439211 B4DSR2 109 aa11.63□□□□□ -0.55
DHFR-201ENST00000439211 GPHB5Q86YW7 130 aa11.63□□□□□ -0.55
DHFR-201ENST00000439211 NDUFC2O95298 119 aa11.63□□□□□ -0.55
DHFR-201ENST00000439211 CRPP02741 224 aa11.63□□□□□ -0.55
DHFR-201ENST00000439211 POLR2KP53803 58 aaKnown RBP11.62□□□□□ -0.55
DHFR-201ENST00000439211 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
DHFR-201ENST00000439211 Q9H8V8 135 aa11.62□□□□□ -0.55
DHFR-201ENST00000439211 IGHV1OR15-1A0A075B7D0 117 aa11.62□□□□□ -0.55
DHFR-201ENST00000439211 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
DHFR-201ENST00000439211 WFDC9Q8NEX5 89 aa11.61□□□□□ -0.55
DHFR-201ENST00000439211 DYNLRB2Q8TF09 96 aa11.61□□□□□ -0.55
DHFR-201ENST00000439211 HRNRQ86YZ3 2850 aaPredicted RBP11.61□□□□□ -0.55
DHFR-201ENST00000439211 JMJD1CQ15652 2540 aa11.61□□□□□ -0.55
DHFR-201ENST00000439211 OXTP01178 125 aa11.61□□□□□ -0.55
DHFR-201ENST00000439211 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 DEFB131AP59861 70 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 A0A0J9YX75 114 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 Q5XG85 94 aa11.6□□□□□ -0.55
DHFR-201ENST00000439211 A6NDX4 124 aa11.59□□□□□ -0.55
DHFR-201ENST00000439211 H3BUA1 57 aa11.59□□□□□ -0.55
DHFR-201ENST00000439211 C11orf44Q8N8P7 122 aa11.59□□□□□ -0.55
DHFR-201ENST00000439211 DEFB136Q30KP8 78 aa11.58□□□□□ -0.56
DHFR-201ENST00000439211 FHL2Q14192 279 aa11.58□□□□□ -0.56
DHFR-201ENST00000439211 IGHV3-16A0A0C4DH30 117 aa11.57□□□□□ -0.56
DHFR-201ENST00000439211 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
DHFR-201ENST00000439211 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
DHFR-201ENST00000439211 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
DHFR-201ENST00000439211 MED14OSP0DP75 135 aa11.57□□□□□ -0.56
DHFR-201ENST00000439211 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
DHFR-201ENST00000439211 LINC00308Q8TCZ7 52 aa11.56□□□□□ -0.56
DHFR-201ENST00000439211 LINC00846Q9NV44 126 aa11.56□□□□□ -0.56
DHFR-201ENST00000439211 HILS1P60008 231 aa11.56□□□□□ -0.56
DHFR-201ENST00000439211 Q6JHZ5 121 aa11.56□□□□□ -0.56
DHFR-201ENST00000439211 ANKRD17O75179 2603 aaKnown RBP11.56□□□□□ -0.56
DHFR-201ENST00000439211 TRBV27A0A0K0K1C4 114 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 A0A087WW49 117 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 AVPP01185 164 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 PRM2P04554 102 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 PSMB8P28062 276 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 PRORYQ9H606 182 aa11.55□□□□□ -0.56
DHFR-201ENST00000439211 SNURFQ9Y675 71 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms