RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZNF415Q09FC8 603 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 Q6ZSN1 163 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 SLC25A29Q8N8R3 303 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 A4D1N5 150 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 HERVK_113P61574 105 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
PTCHD3-201ENST00000438700 C9JAW5 83 aa10.04□□□□□ -0.8
PTCHD3-201ENST00000438700 SBSPONQ8IVN8 264 aa10.04□□□□□ -0.8
PTCHD3-201ENST00000438700 INSP01308 110 aa10.04□□□□□ -0.8
PTCHD3-201ENST00000438700 J3QQQ9 107 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 LINC00482Q8N8I6 264 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 ERG28Q9UKR5 140 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 ATRQ13535 2644 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 SLC25A20O43772 301 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 STHQ8IWL8 128 aa10.03□□□□□ -0.8
PTCHD3-201ENST00000438700 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.8
PTCHD3-201ENST00000438700 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.8
PTCHD3-201ENST00000438700 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
PTCHD3-201ENST00000438700 ANAPC13Q9BS18 74 aa10.02□□□□□ -0.81
PTCHD3-201ENST00000438700 TEP1Q99973 2627 aaKnown RBP10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 WFDC10AQ9H1F0 79 aa10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 VCX2Q9H322 139 aa10.01□□□□□ -0.81
PTCHD3-201ENST00000438700 VWFP04275 2813 aa10□□□□□ -0.81
PTCHD3-201ENST00000438700 IGHV3-33P01772 117 aa10□□□□□ -0.81
PTCHD3-201ENST00000438700 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
PTCHD3-201ENST00000438700 TRAV4A0A0B4J268 109 aa10□□□□□ -0.81
PTCHD3-201ENST00000438700 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
PTCHD3-201ENST00000438700 BEAN1Q3B7T3 259 aa10□□□□□ -0.81
PTCHD3-201ENST00000438700 LYRM7Q5U5X0 104 aa10□□□□□ -0.81
PTCHD3-201ENST00000438700 ZFAND6Q6FIF0 208 aa9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 SPATA3Q8NHX4 192 aa9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 TMEM263Q8WUH6 116 aaKnown RBP9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 EDA2RQ9HAV5 297 aa9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 B5MCH6 92 aa9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 CITED1Q99966 193 aa9.99□□□□□ -0.81
PTCHD3-201ENST00000438700 TEX49A0A1B0GTD5 131 aa9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 FAM104AQ969W3 186 aa9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 C19orf73Q9NVV2 129 aa9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
PTCHD3-201ENST00000438700 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 RHODO00212 210 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 Q1RN00 199 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 SPXQ9BT56 116 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 TRGV1A0A0A0MS02 117 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 FAM110AQ9BQ89 295 aa9.97□□□□□ -0.81
PTCHD3-201ENST00000438700 IGHV3-53P01767 116 aa9.96□□□□□ -0.81
PTCHD3-201ENST00000438700 LINC00467Q9BRT7 94 aa9.96□□□□□ -0.81
PTCHD3-201ENST00000438700 CHCHD7Q9BUK0 85 aa9.96□□□□□ -0.81
PTCHD3-201ENST00000438700 NPC2P61916 151 aa9.95□□□□□ -0.82
PTCHD3-201ENST00000438700 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
PTCHD3-201ENST00000438700 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
PTCHD3-201ENST00000438700 A8MZ25 164 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 LEPROTO15243 131 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 RS1O15537 224 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 TRAV8-3A0A0A6YYJ7 113 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 Q6ZTI0 123 aa9.94□□□□□ -0.82
PTCHD3-201ENST00000438700 CCDC179H3BU77 68 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 TRIAP1O43715 76 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 PRSS2P07478 247 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 GAGE5Q13069 117 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 GAGE6Q13070 117 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 C9orf66Q5T8R8 295 aa9.93□□□□□ -0.82
PTCHD3-201ENST00000438700 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 SNCGO76070 127 aa9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
PTCHD3-201ENST00000438700 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 NDUFV3P56181 108 aaKnown RBP9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
PTCHD3-201ENST00000438700 ATXN8Q156A1 80 aa9.9□□□□□ -0.83
PTCHD3-201ENST00000438700 LITAFQ99732 161 aa9.9□□□□□ -0.83
PTCHD3-201ENST00000438700 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms