RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 FOXA3P55318 350 aaPredicted RBP4.62□□□□□ -1.67
LINC00271-203ENST00000438618 ALKAL2Q6UX46 152 aa4.62□□□□□ -1.67
LINC00271-203ENST00000438618 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
LINC00271-203ENST00000438618 C20orf203Q8NBC4 194 aa4.62□□□□□ -1.67
LINC00271-203ENST00000438618 PGLYRP4Q96LB8 373 aa4.62□□□□□ -1.67
LINC00271-203ENST00000438618 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
LINC00271-203ENST00000438618 HMCN2Q8NDA2 5059 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 TRAV26-2A0A0B4J265 109 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 A8MWL6 223 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 TMEM250H0YL14 139 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 CTRLP40313 264 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 TEX261Q6UWH6 196 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 SDIM1Q6ZPB5 146 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 CNFNQ9BYD5 112 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
LINC00271-203ENST00000438618 GFRA4Q9GZZ7 299 aa4.61□□□□□ -1.67
LINC00271-203ENST00000438618 A0A087WYN8 130 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 PMCHP20382 165 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 RNASEKQ6P5S7 137 aaKnown RBP4.6□□□□□ -1.67
LINC00271-203ENST00000438618 CFAP161Q6P656 301 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 FAM231DQ6ZW35 169 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 BORCS7Q96B45 105 aa4.6□□□□□ -1.67
LINC00271-203ENST00000438618 RPL39LQ96EH5 51 aaKnown RBP4.6□□□□□ -1.67
LINC00271-203ENST00000438618 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.59□□□□□ -1.67
LINC00271-203ENST00000438618 I3L3M4 83 aa4.59□□□□□ -1.67
LINC00271-203ENST00000438618 NCR2O95944 276 aa4.59□□□□□ -1.67
LINC00271-203ENST00000438618 LYPD6BQ8NI32 183 aa4.59□□□□□ -1.67
LINC00271-203ENST00000438618 IGHV3-64A0A075B6Q5 118 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
LINC00271-203ENST00000438618 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
LINC00271-203ENST00000438618 SDHAF1A6NFY7 115 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 ZNF727A8MUV8 499 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 H7C423 109 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 APCSP02743 223 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
LINC00271-203ENST00000438618 CNBPP62633 177 aaKnown RBP4.58□□□□□ -1.68
LINC00271-203ENST00000438618 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 SMIM7Q9BQ49 75 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
LINC00271-203ENST00000438618 A0A1B0GUT8 65 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 HIGD1CA8MV81 97 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 PANO1I0J062 215 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 OXTP01178 125 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 SRP19P09132 144 aaKnown RBP4.57□□□□□ -1.68
LINC00271-203ENST00000438618 FGF6P10767 208 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 RAB4AP20338 218 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
LINC00271-203ENST00000438618 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 LINC01551Q86U37 167 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 TSKUQ8WUA8 353 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 BTF3L4Q96K17 158 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 TMEM191AQ9H0A3 160 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 OSTCQ9NRP0 149 aa4.57□□□□□ -1.68
LINC00271-203ENST00000438618 TRBV6-5A0A0K0K1A5 114 aa4.56□□□□□ -1.68
LINC00271-203ENST00000438618 FAM231BA6NCW3 169 aa4.56□□□□□ -1.68
LINC00271-203ENST00000438618 NDUFS6O75380 124 aaKnown RBP4.56□□□□□ -1.68
LINC00271-203ENST00000438618 RPS10P46783 165 aaKnown RBP4.56□□□□□ -1.68
LINC00271-203ENST00000438618 PCP4P48539 62 aa4.56□□□□□ -1.68
LINC00271-203ENST00000438618 RIGQ13278 110 aa4.56□□□□□ -1.68
LINC00271-203ENST00000438618 CHCHD10Q8WYQ3 142 aaPredicted RBP4.56□□□□□ -1.68
LINC00271-203ENST00000438618 FAM210AQ96ND0 272 aa4.56□□□□□ -1.68
LINC00271-203ENST00000438618 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
LINC00271-203ENST00000438618 VCYO14598 125 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 TSHBP01222 138 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 ESDP10768 282 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 ZNF25P17030 456 aaPredicted RBP4.55□□□□□ -1.68
LINC00271-203ENST00000438618 XCL1P47992 114 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 POLR2KP53803 58 aaKnown RBP4.55□□□□□ -1.68
LINC00271-203ENST00000438618 COX6A2Q02221 97 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 SS18Q15532 418 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 HIGD2BQ4VC39 106 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 C15orf56Q8N910 161 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 NUP35Q8NFH5 326 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 OR5A1Q8NGJ0 315 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
LINC00271-203ENST00000438618 LINC00959A0A1B0GUT2 108 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 SMKR1H3BMG3 65 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 CCL25O15444 150 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 PPP1R17O96001 155 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 FCER1GP30273 86 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 CIRBPQ14011 172 aaKnown RBP4.54□□□□□ -1.68
LINC00271-203ENST00000438618 PEA15Q15121 130 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 ZNF664Q8N3J9 261 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 TMEM242Q9NWH2 141 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 V9GYV3 84 aa4.54□□□□□ -1.68
LINC00271-203ENST00000438618 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
LINC00271-203ENST00000438618 IGKV2-24A0A0C4DH68 120 aa4.53□□□□□ -1.68
LINC00271-203ENST00000438618 TRBV27A0A0K0K1C4 114 aa4.53□□□□□ -1.68
LINC00271-203ENST00000438618 A0A1B0GVG6 124 aa4.53□□□□□ -1.68
LINC00271-203ENST00000438618 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
LINC00271-203ENST00000438618 RPL23P62829 140 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms