RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 A0A1B0GUT8 65 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 RPS10P46783 165 aaKnown RBP5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 Q0VG73 95 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 TMEM241Q24JQ0 296 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 Q6ZSA8 131 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 LINC00269Q8N2A0 174 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 NUP35Q8NFH5 326 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
HERPUD2-206ENST00000438224 FAM231BA6NCW3 169 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 SDHAF1A6NFY7 115 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 HLA-DQA1P01909 254 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 CRPP02741 224 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 COTL1Q14019 142 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 ADIRFQ15847 76 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 MIAQ16674 131 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 KCNIP4Q6PIL6 250 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 AMN1Q8IY45 258 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 FRZBQ92765 325 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 TMEM191AQ9H0A3 160 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 NAT8Q9UHE5 227 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
HERPUD2-206ENST00000438224 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 A0A1B0GUV1 79 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 NCR2O95944 276 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 RAB4AP20338 218 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 PKIAP61925 76 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 REG3AQ06141 175 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 FAM74A3Q4VXF1 159 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 Q5VSD8 79 aa5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 CHTOPQ9Y3Y2 248 aaKnown RBP5.55□□□□□ -1.52
HERPUD2-206ENST00000438224 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 TSHBP01222 138 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 PRSS1P07477 247 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 PEA15Q15121 130 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 SMIM15Q7Z3B0 74 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 NRACQ8N912 160 aa5.54□□□□□ -1.52
HERPUD2-206ENST00000438224 FAT1Q14517 4588 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 EPM2AB3EWF7 344 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 ESDP10768 282 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 TMEM242Q9NWH2 141 aa5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
HERPUD2-206ENST00000438224 A0A1B0GXF2 115 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 UBE2L6O14933 153 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 APCSP02743 223 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 FGF6P10767 208 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 IFITM2Q01629 132 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 RIGQ13278 110 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 MRPL51Q4U2R6 128 aaKnown RBP5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 FAM104BQ5XKR9 115 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 ST20Q9HBF5 79 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 NAT8BQ9UHF3 227 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
HERPUD2-206ENST00000438224 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 TRBV27A0A0K0K1C4 114 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 PANO1I0J062 215 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 I3L3M4 83 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 SLPIP03973 132 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 PMCHP20382 165 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 MRPL54Q6P161 138 aaKnown RBP5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
HERPUD2-206ENST00000438224 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 AMMECR1LQ6DCA0 310 aa5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 C15orf56Q8N910 161 aa5.5□□□□□ -1.53
HERPUD2-206ENST00000438224 H7C423 109 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 CLLU1Q5K131 121 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 CIRBP-AS1Q8TBR5 109 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
HERPUD2-206ENST00000438224 IGLV5-39A0A0G2JS06 123 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 NPYP01303 97 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 INAFM2P0DMQ5 153 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 HBBP68871 147 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 CHCHD10Q8WYQ3 142 aaPredicted RBP5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
HERPUD2-206ENST00000438224 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms