RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 UBE2D1P51668 147 aa16.65■□□□□ 0.26
TOP2B-204ENST00000435706 M0QXV9 152 aa16.64■□□□□ 0.25
TOP2B-204ENST00000435706 MRPL55Q7Z7F7 128 aaKnown RBP16.64■□□□□ 0.25
TOP2B-204ENST00000435706 Q8NA96 180 aa16.64■□□□□ 0.25
TOP2B-204ENST00000435706 UBE2D4Q9Y2X8 147 aa16.64■□□□□ 0.25
TOP2B-204ENST00000435706 IGIPA6NJ69 53 aa16.63■□□□□ 0.25
TOP2B-204ENST00000435706 Q6JHZ5 121 aa16.62■□□□□ 0.25
TOP2B-204ENST00000435706 HCFC1P51610 2035 aa16.62■□□□□ 0.25
TOP2B-204ENST00000435706 UBE2D3P61077 147 aa16.61■□□□□ 0.25
TOP2B-204ENST00000435706 UBE2D2P62837 147 aa16.61■□□□□ 0.25
TOP2B-204ENST00000435706 CRIP2P52943 208 aaPredicted RBP16.61■□□□□ 0.25
TOP2B-204ENST00000435706 SMIM11BQ8TCY0 68 aa16.61■□□□□ 0.25
TOP2B-204ENST00000435706 POM121L12Q8N7R1 296 aa16.61■□□□□ 0.25
TOP2B-204ENST00000435706 TRBV6-8A0A0A6YYG3 113 aa16.6■□□□□ 0.25
TOP2B-204ENST00000435706 KLLNB2CW77 178 aa16.6■□□□□ 0.25
TOP2B-204ENST00000435706 CRYGDP07320 174 aa16.6■□□□□ 0.25
TOP2B-204ENST00000435706 F8W735 103 aaPredicted RBP16.6■□□□□ 0.25
TOP2B-204ENST00000435706 ANKHD1Q8IWZ3 2542 aaKnown RBP16.59■□□□□ 0.25
TOP2B-204ENST00000435706 MRPS36P82909 103 aaKnown RBP16.59■□□□□ 0.25
TOP2B-204ENST00000435706 C9orf85Q96MD7 179 aa16.59■□□□□ 0.25
TOP2B-204ENST00000435706 A0A096LNJ9 63 aa16.59■□□□□ 0.25
TOP2B-204ENST00000435706 DEFB114Q30KQ6 69 aa16.59■□□□□ 0.25
TOP2B-204ENST00000435706 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.25
TOP2B-204ENST00000435706 TANC2Q9HCD6 1990 aa16.58■□□□□ 0.24
TOP2B-204ENST00000435706 Q8N6K4 173 aa16.58■□□□□ 0.24
TOP2B-204ENST00000435706 CCKP06307 115 aa16.57■□□□□ 0.24
TOP2B-204ENST00000435706 PRR14LQ5THK1 2151 aa16.56■□□□□ 0.24
TOP2B-204ENST00000435706 IGLV4-69A0A075B6H9 119 aa16.56■□□□□ 0.24
TOP2B-204ENST00000435706 TRBV6-4A0A1B0GX49 114 aa16.56■□□□□ 0.24
TOP2B-204ENST00000435706 LINC00526Q96FQ7 95 aa16.55■□□□□ 0.24
TOP2B-204ENST00000435706 FAM19A3Q7Z5A8 133 aa16.55■□□□□ 0.24
TOP2B-204ENST00000435706 XAGE1AQ9HD64 81 aa16.55■□□□□ 0.24
TOP2B-204ENST00000435706 Q6ZQY7 126 aa16.54■□□□□ 0.24
TOP2B-204ENST00000435706 DCANP1Q8TF63 244 aa16.54■□□□□ 0.24
TOP2B-204ENST00000435706 HRCT1Q6UXD1 115 aa16.54■□□□□ 0.24
TOP2B-204ENST00000435706 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
TOP2B-204ENST00000435706 WNK1Q9H4A3 2382 aa16.54■□□□□ 0.24
TOP2B-204ENST00000435706 SMIM9A6NGZ8 99 aa16.53■□□□□ 0.24
TOP2B-204ENST00000435706 TSPEAR-AS2P59090 65 aa16.53■□□□□ 0.24
TOP2B-204ENST00000435706 IGKV4-1P06312 121 aa16.52■□□□□ 0.24
TOP2B-204ENST00000435706 C3orf84H3BNL1 204 aa16.51■□□□□ 0.23
TOP2B-204ENST00000435706 PSMG3-AS1Q96PY0 264 aa16.51■□□□□ 0.23
TOP2B-204ENST00000435706 HIGD2AQ9BW72 106 aa16.5■□□□□ 0.23
TOP2B-204ENST00000435706 C1orf158Q8N1D5 194 aa16.49■□□□□ 0.23
TOP2B-204ENST00000435706 PTPRQQ9UMZ3 2332 aa16.49■□□□□ 0.23
TOP2B-204ENST00000435706 SMIM26A0A096LP01 95 aa16.49■□□□□ 0.23
TOP2B-204ENST00000435706 C10orf99Q6UWK7 81 aa16.48■□□□□ 0.23
TOP2B-204ENST00000435706 LYRM9A8MSI8 78 aa16.48■□□□□ 0.23
TOP2B-204ENST00000435706 Q6ZSV7 163 aa16.47■□□□□ 0.23
TOP2B-204ENST00000435706 C1orf195Q5TG92 126 aa16.47■□□□□ 0.23
TOP2B-204ENST00000435706 DNAJC9-AS1A6NH13 148 aa16.46■□□□□ 0.23
TOP2B-204ENST00000435706 FAM208BQ5VWN6 2430 aa16.46■□□□□ 0.23
TOP2B-204ENST00000435706 Q6YL49 198 aa16.46■□□□□ 0.23
TOP2B-204ENST00000435706 WFDC10BQ8IUB3 73 aa16.46■□□□□ 0.23
TOP2B-204ENST00000435706 A0A087WVE0 104 aa16.46■□□□□ 0.22
TOP2B-204ENST00000435706 B9D2Q9BPU9 175 aa16.46■□□□□ 0.22
TOP2B-204ENST00000435706 ZFHX2Q9C0A1 2572 aaPredicted RBP16.46■□□□□ 0.22
TOP2B-204ENST00000435706 SPG11Q96JI7 2443 aa16.45■□□□□ 0.22
TOP2B-204ENST00000435706 LINC00959A0A1B0GUT2 108 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 J3QKU1 62 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 CD164L2Q6UWJ8 174 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 SERP1Q9Y6X1 66 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 COX8CQ7Z4L0 72 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 IGKV2-24A0A0C4DH68 120 aa16.43■□□□□ 0.22
TOP2B-204ENST00000435706 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
TOP2B-204ENST00000435706 IGLV2-18A0A075B6J9 118 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 PRM2P04554 102 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 CDIP1Q9H305 208 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 MIFP14174 115 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 C11orf71Q6IPW1 123 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 TRAV7A0A075B6U4 112 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 LINC00242Q5T6M2 205 aa16.42■□□□□ 0.22
TOP2B-204ENST00000435706 CDC42SE2Q9NRR3 84 aa16.41■□□□□ 0.22
TOP2B-204ENST00000435706 LOC100131303A0A0U1RQF7 123 aa16.41■□□□□ 0.22
TOP2B-204ENST00000435706 FAM19A5Q7Z5A7 132 aaPredicted RBP16.41■□□□□ 0.22
TOP2B-204ENST00000435706 SEC61GP60059 68 aa16.4■□□□□ 0.22
TOP2B-204ENST00000435706 ADAMTSL4-AS1Q5T5F5 129 aa16.4■□□□□ 0.22
TOP2B-204ENST00000435706 RPL28P46779 137 aaKnown RBP16.4■□□□□ 0.22
TOP2B-204ENST00000435706 PRR4Q16378 134 aa16.4■□□□□ 0.22
TOP2B-204ENST00000435706 FAM19A1Q7Z5A9 133 aa16.4■□□□□ 0.22
TOP2B-204ENST00000435706 NAV3Q8IVL0 2385 aa16.39■□□□□ 0.21
TOP2B-204ENST00000435706 EML5Q05BV3 1969 aa16.38■□□□□ 0.21
TOP2B-204ENST00000435706 A0A096LNI7 61 aa16.38■□□□□ 0.21
TOP2B-204ENST00000435706 NTM-AS1Q6ZSK4 140 aa16.38■□□□□ 0.21
TOP2B-204ENST00000435706 C19orf84I3L1E1 186 aa16.38■□□□□ 0.21
TOP2B-204ENST00000435706 SMIM1B2RUZ4 78 aa16.37■□□□□ 0.21
TOP2B-204ENST00000435706 ARHGAP32A7KAX9 2087 aa16.37■□□□□ 0.21
TOP2B-204ENST00000435706 BBC3Q96PG8 261 aaPredicted RBP16.37■□□□□ 0.21
TOP2B-204ENST00000435706 COX17Q14061 63 aa16.37■□□□□ 0.21
TOP2B-204ENST00000435706 KLK5Q9Y337 293 aaPredicted RBP16.37■□□□□ 0.21
TOP2B-204ENST00000435706 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
TOP2B-204ENST00000435706 M0R378 163 aa16.36■□□□□ 0.21
TOP2B-204ENST00000435706 A0A087WYN8 130 aa16.35■□□□□ 0.21
TOP2B-204ENST00000435706 IGLV1-40P01703 118 aa16.35■□□□□ 0.21
TOP2B-204ENST00000435706 Q8IZM0 81 aa16.35■□□□□ 0.21
TOP2B-204ENST00000435706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.35■□□□□ 0.21
TOP2B-204ENST00000435706 WFDC13Q8IUB5 93 aa16.35■□□□□ 0.21
TOP2B-204ENST00000435706 A6NED7 52 aa16.34■□□□□ 0.21
TOP2B-204ENST00000435706 IGKV2-28A0A075B6P5 120 aa16.34■□□□□ 0.21
TOP2B-204ENST00000435706 IGKV2D-28P01615 120 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms