RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TLN1Q9Y490 2541 aaKnown RBP5.56□□□□□ -1.52
CPSF6-202ENST00000435070 J3QKU1 62 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 NXPH4O95158 308 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 APOC4P55056 127 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 DEFB131AP59861 70 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 LINC00526Q96FQ7 95 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 LY6LH3BQJ8 138 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 M0R1W7 72 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 MINOS1Q5TGZ0 78 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 CLPSL2Q6UWE3 100 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 MINOS1-NBL1R4GNA1 71 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV7-81A0A0B4J1V7 117 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 FAM236DA0A1B0GTK5 79 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 LYRM9A8MSI8 78 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 FAM236CP0DP71 79 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 C4orf26Q17RF5 130 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 CUL9Q8IWT3 2517 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 E7EQL1 145 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 TRBV12-3P01733 135 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 SAA4P35542 130 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 COX7CP15954 63 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 LINC00315P59091 139 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 DAZ2Q13117 558 aaKnown RBP5.55□□□□□ -1.52
CPSF6-202ENST00000435070 DAZ4Q86SG3 579 aaKnown RBP5.55□□□□□ -1.52
CPSF6-202ENST00000435070 LINC00643Q86TS7 51 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 USMG5Q96IX5 58 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 RHPN1-AS1Q9BWJ2 59 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 DAZ1Q9NQZ3 744 aaKnown RBP5.55□□□□□ -1.52
CPSF6-202ENST00000435070 DAZ3Q9NR90 486 aaKnown RBP5.55□□□□□ -1.52
CPSF6-202ENST00000435070 ATP6V0E1O15342 81 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 RNF152Q8N8N0 203 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 CCDC140Q96MF4 163 aa5.55□□□□□ -1.52
CPSF6-202ENST00000435070 LRRC75A-AS1Q8N1F1 130 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 SPG11Q96JI7 2443 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 NPBQ8NG41 125 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 MSMBP08118 114 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 AKAP13Q12802 2813 aa5.54□□□□□ -1.52
CPSF6-202ENST00000435070 A0A087WVE0 104 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 PFN2P35080 140 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 UBE2BP63146 152 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 TMEM61Q8N0U2 210 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 Q9HAA7 133 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 CSPG4Q6UVK1 2322 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 BAALC-AS2P0C853 105 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 LITAFQ99732 161 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 TTC28Q96AY4 2481 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 RMI2Q96E14 147 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 UNQ9165/PRO28630Q6UXU0 137 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 TIMM17BO60830 172 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 SPINK13Q1W4C9 94 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 NREPQ16612 68 aa5.53□□□□□ -1.52
CPSF6-202ENST00000435070 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
CPSF6-202ENST00000435070 LY6G5BQ8NDX9 201 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 IMUPQ9GZP8 106 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 A0A087WW49 117 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 TIRAPP58753 221 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 MIAQ16674 131 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 C9orf139Q6ZV77 190 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 SERP1Q9Y6X1 66 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 COL12A1Q99715 3063 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 Q8N2B8 174 aa5.52□□□□□ -1.53
CPSF6-202ENST00000435070 TRBV27A0A0K0K1C4 114 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 ORMDL1Q9P0S3 153 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 Q8N9W7 124 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 OXTP01178 125 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 IGHV4-59P01825 116 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 C2orf48Q96LS8 159 aa5.51□□□□□ -1.53
CPSF6-202ENST00000435070 DCANP1Q8TF63 244 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 MRPL53Q96EL3 112 aaKnown RBP5.5□□□□□ -1.53
CPSF6-202ENST00000435070 TRAV13-2A0A0B4J235 113 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 PROK1P58294 105 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 IGHV1-69P01742 117 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 HIST2H2BCQ6DN03 193 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 M0QY20 66 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 VSIG2Q96IQ7 327 aa5.5□□□□□ -1.53
CPSF6-202ENST00000435070 Q9UF83 564 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-202ENST00000435070 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
CPSF6-202ENST00000435070 LENEPQ9Y5L5 61 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 CUBNO60494 3623 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 ANGP03950 147 aaKnown RBP5.49□□□□□ -1.53
CPSF6-202ENST00000435070 LINC01600Q96MT4 127 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 CRYGAP11844 174 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 FAM19A4Q96LR4 140 aa5.49□□□□□ -1.53
CPSF6-202ENST00000435070 EDN2P20800 178 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 IGHV4-30-2A0A087WSY4 118 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms