RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 IGKV2-29A2NJV5 120 aaPredicted RBP3.14□□□□□ -1.91
UBE4A-202ENST00000431736 VAMP3Q15836 100 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 RAB37Q96AX2 223 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 LINC00862A6NCI5 91 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 LINC00158P58513 81 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 S100A7L2Q5SY68 101 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 NEXN-AS1Q8NBZ9 246 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 MBD3L1Q8WWY6 194 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 SPANXA1Q9NS26 97 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 C5orf52A6NGY3 159 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 A8MTW9 85 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 LTAP01374 205 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 CXCL5P42830 114 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 RPL28P46779 137 aaKnown RBP3.14□□□□□ -1.91
UBE4A-202ENST00000431736 UBE2D3P61077 147 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 UBE2D2P62837 147 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 C1orf137Q5JT78 98 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 C5orf38Q86SI9 138 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 F8WDY8 70 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 GHRHP01286 108 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 COX6CP09669 75 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 C11orf72Q8NBR9 251 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 JPT2Q9H910 190 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 LEPROTL1O95214 131 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 OXTP01178 125 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
UBE4A-202ENST00000431736 C19orf71A6NCJ1 209 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 H0YIZ8 118 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 KIAA1644Q3SXP7 199 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 MPV17L2Q567V2 206 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 CHAC1Q9BUX1 264 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 VAMP8Q9BV40 100 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 MRPL18Q9H0U6 180 aaKnown RBP3.13□□□□□ -1.91
UBE4A-202ENST00000431736 RNASE7Q9H1E1 156 aaKnown RBP3.13□□□□□ -1.91
UBE4A-202ENST00000431736 CST9LQ9H4G1 147 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 WFDC1Q9HC57 220 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 TMEM218A2RU14 115 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 PRR4Q16378 134 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 ZNF664Q8N3J9 261 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 C12orf57Q99622 126 aa3.13□□□□□ -1.91
UBE4A-202ENST00000431736 ASPMQ8IZT6 3477 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 H7C2G1 150 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 IQCJQ1A5X6 159 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 C9orf62Q8N4C0 152 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 OSTCQ9NRP0 149 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 HERVK_113P63121 156 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 SFTA2Q6UW10 78 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 DNAL4O96015 105 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 ERASQ7Z444 233 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 RNF222A6NCQ9 220 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 BTCP35070 178 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 COX6A2Q02221 97 aa3.12□□□□□ -1.91
UBE4A-202ENST00000431736 FAM19A5Q7Z5A7 132 aaPredicted RBP3.12□□□□□ -1.91
UBE4A-202ENST00000431736 F8WEM9 126 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 MRPS12O15235 138 aaKnown RBP3.11□□□□□ -1.91
UBE4A-202ENST00000431736 PRR9Q5T870 116 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 CD164L2Q6UWJ8 174 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 GFRA4Q9GZZ7 299 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 A0A0U1RRA0 63 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 LAMTOR2Q9Y2Q5 125 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 HAMPP81172 84 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 CT83Q5H943 113 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 C20orf78Q9BR46 151 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 ZNF815PA8K554 130 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 SLC25A34Q6PIV7 304 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 LOC400499M0QZD8 3231 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 ETDCA0A1B0GVM5 59 aa3.11□□□□□ -1.91
UBE4A-202ENST00000431736 PHOX2AO14813 284 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 OCC1Q8TAD7 63 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 TMEM141Q96I45 108 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 IFITM3Q01628 133 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 JOSD1Q15040 202 aaPredicted RBP3.1□□□□□ -1.91
UBE4A-202ENST00000431736 Q5BKY6 102 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
UBE4A-202ENST00000431736 RNASE3P12724 160 aaKnown RBP3.1□□□□□ -1.91
UBE4A-202ENST00000431736 A6NDN8 102 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 TMEM238C9JI98 176 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 HIST1H4GQ99525 98 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 SSBP4Q9BWG4 385 aaPredicted RBP3.09□□□□□ -1.91
UBE4A-202ENST00000431736 A0A1B0GUV1 79 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 ATP5L2Q7Z4Y8 100 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 ZNF80P51504 273 aaPredicted RBP3.09□□□□□ -1.91
UBE4A-202ENST00000431736 SCXQ7RTU7 201 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 ZANQ9Y493 2812 aa3.09□□□□□ -1.91
UBE4A-202ENST00000431736 DCHS2Q6V1P9 2916 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 PLAC8L1A1L4L8 177 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 TRAV9-1A0A075B6T8 112 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 A0A1B0GV90 55 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 HBDP02042 147 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 C2orf48Q96LS8 159 aa3.09□□□□□ -1.92
UBE4A-202ENST00000431736 D6R8Y8 96 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 M0QXV9 152 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 SRP19P09132 144 aaKnown RBP3.08□□□□□ -1.92
UBE4A-202ENST00000431736 DNLZQ5SXM8 178 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 BOD1L2Q8IYS8 172 aa3.08□□□□□ -1.92
UBE4A-202ENST00000431736 SNAI2O43623 268 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms