RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TRBV7-3A0A075B6L6 115 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 TNFP01375 233 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 COX6B1P14854 86 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 MEIG1Q5JSS6 88 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 Q6JHZ5 121 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 MYOZ3Q8TDC0 251 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 TSC22D3Q99576 134 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
CDC40-204ENST00000431461 WDR7Q9Y4E6 1490 aa-0.22□□□□□ -2.44
CDC40-204ENST00000431461 PTPRQQ9UMZ3 2332 aa-0.22□□□□□ -2.44
CDC40-204ENST00000431461 SPINK4O60575 86 aa-0.22□□□□□ -2.44
CDC40-204ENST00000431461 MGPP08493 103 aa-0.22□□□□□ -2.44
CDC40-204ENST00000431461 NDUFA4L2Q9NRX3 87 aa-0.22□□□□□ -2.44
CDC40-204ENST00000431461 KTN1Q86UP2 1357 aaKnown RBP-0.22□□□□□ -2.45
CDC40-204ENST00000431461 ARAP2Q8WZ64 1704 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 I3L2K1 104 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 HMGN1P05114 100 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 COMMD6Q7Z4G1 85 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 C5orf38Q86SI9 138 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.23□□□□□ -2.45
CDC40-204ENST00000431461 FAIMQ9NVQ4 179 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 UQCR10Q9UDW1 63 aa-0.23□□□□□ -2.45
CDC40-204ENST00000431461 CPSF1Q10570 1443 aaKnown RBP-0.23□□□□□ -2.45
CDC40-204ENST00000431461 KIF21AQ7Z4S6 1674 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 ZNF292O60281 2723 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 TENM4Q6N022 2769 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 FXYD6-FXYD2A0A087WZ82 144 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 IGLC7A0M8Q6 106 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 K7EP13 123 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 SFT2D2O95562 160 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 ATP5EP56381 51 aaPredicted RBP-0.24□□□□□ -2.45
CDC40-204ENST00000431461 MRPL54Q6P161 138 aaKnown RBP-0.24□□□□□ -2.45
CDC40-204ENST00000431461 DEFB123Q8N688 67 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 TMEM263Q8WUH6 116 aaKnown RBP-0.24□□□□□ -2.45
CDC40-204ENST00000431461 PAPPAQ13219 1627 aa-0.24□□□□□ -2.45
CDC40-204ENST00000431461 RIMS1Q86UR5 1692 aaKnown RBP-0.24□□□□□ -2.45
CDC40-204ENST00000431461 MYO7BQ6PIF6 2116 aa-0.25□□□□□ -2.45
CDC40-204ENST00000431461 HMCN2Q8NDA2 5059 aa-0.25□□□□□ -2.45
CDC40-204ENST00000431461 HMGN4O00479 90 aa-0.25□□□□□ -2.45
CDC40-204ENST00000431461 LSM10Q969L4 123 aaKnown RBP-0.25□□□□□ -2.45
CDC40-204ENST00000431461 LINC00472Q9H8W2 130 aa-0.25□□□□□ -2.45
CDC40-204ENST00000431461 POLA1P09884 1462 aaPredicted RBP-0.25□□□□□ -2.45
CDC40-204ENST00000431461 PLCE1Q9P212 2302 aa-0.25□□□□□ -2.45
CDC40-204ENST00000431461 DOCK1Q14185 1865 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 LAMC1P11047 1609 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 GAPVD1Q14C86 1478 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 SMG6Q86US8 1419 aaKnown RBP-0.26□□□□□ -2.45
CDC40-204ENST00000431461 TRBV7-4A0A0J9YYF1 115 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 UBE2L5PA0A1B0GUS4 154 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 MIF4GDA9UHW6 222 aaKnown RBP-0.26□□□□□ -2.45
CDC40-204ENST00000431461 K7EQZ3 153 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 NDUFA2O43678 99 aa-0.26□□□□□ -2.45
CDC40-204ENST00000431461 UBE2L3P68036 154 aaKnown RBP-0.26□□□□□ -2.45
CDC40-204ENST00000431461 NXT2Q9NPJ8 142 aaKnown RBP-0.26□□□□□ -2.45
CDC40-204ENST00000431461 MYOM1P52179 1685 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 BICRAQ9NZM4 1560 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 F6UZH7 168 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 GNG7O60262 68 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 AKAIN1P0CW23 69 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 CATR1Q13166 79 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 USMG5Q96IX5 58 aa-0.27□□□□□ -2.45
CDC40-204ENST00000431461 USF3Q68DE3 2245 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 SETBP1Q9Y6X0 1596 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 FLNAP21333 2647 aaKnown RBP-0.28□□□□□ -2.45
CDC40-204ENST00000431461 MYH7P12883 1935 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 TCHHQ07283 1943 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 VWFP04275 2813 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 PKD1L1Q8TDX9 2849 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 EFCAB10A6NFE3 127 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 FAM24AA6NFZ4 105 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 PRM1P04553 51 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 COX6CP09669 75 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 COX8AP10176 69 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 PP6455Q8WZ26 134 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 FAM167A-AS1Q96KT0 104 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 PRO1933Q9H354 126 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 CSMD3Q7Z407 3707 aa-0.28□□□□□ -2.45
CDC40-204ENST00000431461 SPTBN1Q01082 2364 aaKnown RBP-0.28□□□□□ -2.45
CDC40-204ENST00000431461 A2ML1A8K2U0 1454 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 CCDC141Q6ZP82 1450 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 LOC730098B7Z3J9 87 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 CHKB-CPT1BH3BT56 60 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 SPRR1BP22528 89 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 SPRR4Q96PI1 79 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 CDC42SE2Q9NRR3 84 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 ARHGEF12Q9NZN5 1544 aa-0.29□□□□□ -2.46
CDC40-204ENST00000431461 DSTQ03001 7570 aaKnown RBP-0.29□□□□□ -2.46
CDC40-204ENST00000431461 UBA52P62987 128 aaKnown RBP-0.3□□□□□ -2.46
CDC40-204ENST00000431461 IER3IP1Q9Y5U9 82 aa-0.3□□□□□ -2.46
CDC40-204ENST00000431461 TSC2P49815 1807 aa-0.3□□□□□ -2.46
CDC40-204ENST00000431461 ZNF236Q9UL36 1845 aa-0.3□□□□□ -2.46
CDC40-204ENST00000431461 ZANQ9Y493 2812 aa-0.3□□□□□ -2.46
CDC40-204ENST00000431461 MAGI1Q96QZ7 1491 aaPredicted RBP-0.3□□□□□ -2.46
CDC40-204ENST00000431461 MBD5Q9P267 1494 aa-0.3□□□□□ -2.46
CDC40-204ENST00000431461 TULP4Q9NRJ4 1543 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 GOLGA4Q13439 2230 aaKnown RBP-0.31□□□□□ -2.46
CDC40-204ENST00000431461 NAP1L6A6NFF2 107 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 H3BQ15 152 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms