RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 LRRK1Q38SD2 2015 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 A0A1B0GXF2 115 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 SLPIP03973 132 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 EIF4EBP1Q13541 118 aaPredicted RBP3.28□□□□□ -1.88
LRRK2-204ENST00000430804 PKD1L2Q7Z442 2459 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 SYS1-DBNDD2H3BUS1 97 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 SPANXCQ9NY87 97 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 X6R8D5 127 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 MSMPQ1L6U9 139 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 NCKAP5O14513 1909 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 CDSNQ15517 529 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 ODF3L2Q3SX64 289 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 Q8N6K4 173 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 RPL39LQ96EH5 51 aaKnown RBP3.28□□□□□ -1.88
LRRK2-204ENST00000430804 WFDC1Q9HC57 220 aa3.28□□□□□ -1.88
LRRK2-204ENST00000430804 PTPRDP23468 1912 aa3.28□□□□□ -1.89
LRRK2-204ENST00000430804 TEX49A0A1B0GTD5 131 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 COX6A2Q02221 97 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 LYPD5Q6UWN5 251 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 MED13LQ71F56 2210 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 B5MCH6 92 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 Q8N9L7 120 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 PLXND1Q9Y4D7 1925 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 J3KT08 172 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 KIF25-AS1Q9Y6Z4 181 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 CRIP2P52943 208 aaPredicted RBP3.27□□□□□ -1.89
LRRK2-204ENST00000430804 WNK1Q9H4A3 2382 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 JMJD1CQ15652 2540 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
LRRK2-204ENST00000430804 BRWD1-AS2P59051 145 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 KIF26AQ9ULI4 1882 aaPredicted RBP3.26□□□□□ -1.89
LRRK2-204ENST00000430804 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 ACYP1P07311 99 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 Q6ZUT4 128 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 LTBP2Q14767 1821 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 ADAMTS20P59510 1910 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 M0R2T5 61 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 MTORP42345 2549 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 LINC00315P59091 139 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 SPACA4Q8TDM5 124 aa3.26□□□□□ -1.89
LRRK2-204ENST00000430804 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 CFC1BP0CG36 223 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 CFC1P0CG37 223 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
LRRK2-204ENST00000430804 FASNP49327 2511 aaKnown RBP3.25□□□□□ -1.89
LRRK2-204ENST00000430804 V9GYV3 84 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 ZFYVE26Q68DK2 2539 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 TRBV24-1A0A075B6N3 115 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 C11orf86A6NJI1 115 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 C22orf34Q6ZV56 151 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 COL5A1P20908 1838 aaPredicted RBP3.25□□□□□ -1.89
LRRK2-204ENST00000430804 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
LRRK2-204ENST00000430804 IGLC2P0DOY2 106 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 Q8IZM0 81 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 CARHSP1Q9Y2V2 147 aaKnown RBP3.24□□□□□ -1.89
LRRK2-204ENST00000430804 PRR14LQ5THK1 2151 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 DEFB1P60022 68 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 BEAN1Q3B7T3 259 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 HIST2H2BDQ6DRA6 164 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 MAPKAPK5-AS1Q8N8E1 139 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 TOMM6Q96B49 74 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 TP53TG3Q9ULZ0 132 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 K7EIL1 84 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 C9orf116Q5BN46 136 aaPredicted RBP3.24□□□□□ -1.89
LRRK2-204ENST00000430804 SHANK1Q9Y566 2161 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 CYSRT1A8MQ03 144 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
LRRK2-204ENST00000430804 C3orf22Q8N5N4 141 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 C1orf147Q96MC9 270 aaPredicted RBP3.24□□□□□ -1.89
LRRK2-204ENST00000430804 ZFAND3Q9H8U3 227 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 IGF2RP11717 2491 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 hDV103S1A0JD37 113 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 LINC00846Q9NV44 126 aa3.24□□□□□ -1.89
LRRK2-204ENST00000430804 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 ABCA12Q86UK0 2595 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 WFDC10BQ8IUB3 73 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 NYNRINQ9P2P1 1898 aaKnown RBP3.23□□□□□ -1.89
LRRK2-204ENST00000430804 LOC100131303A0A0U1RQF7 123 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 Q9BRP9 147 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 ANAPC13Q9BS18 74 aa3.23□□□□□ -1.89
LRRK2-204ENST00000430804 A8MZ25 164 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 RPL39P62891 51 aaKnown RBP3.22□□□□□ -1.89
LRRK2-204ENST00000430804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.22□□□□□ -1.89
LRRK2-204ENST00000430804 Q6ZS46 218 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 KIAA2026Q5HYC2 2103 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
LRRK2-204ENST00000430804 CCKP06307 115 aa3.22□□□□□ -1.89
LRRK2-204ENST00000430804 PATE2Q6UY27 113 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms