RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
NEDD1-203ENST00000429527 IGHV3-66A0A0C4DH42 116 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 RHODO00212 210 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 FAM240AA0A1B0GVK7 77 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 DEFB114Q30KQ6 69 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 RHPN1-AS1Q9BWJ2 59 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 ZNF688P0C7X2 276 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
NEDD1-203ENST00000429527 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
NEDD1-203ENST00000429527 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV3-11P01762 117 aa6.9□□□□□ -1.31
NEDD1-203ENST00000429527 S100A4P26447 101 aaKnown RBP6.9□□□□□ -1.31
NEDD1-203ENST00000429527 TIMM21Q9BVV7 248 aa6.9□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 A8MWV9 139 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 I3L3M4 83 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
NEDD1-203ENST00000429527 XGP55808 180 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
NEDD1-203ENST00000429527 SYNJ2BPP57105 145 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
NEDD1-203ENST00000429527 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 H3BT86 120 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 IFITM1P13164 125 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 C3orf84H3BNL1 204 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 MGPP08493 103 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
NEDD1-203ENST00000429527 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 ANKRD29Q8N6D5 301 aa6.87□□□□□ -1.31
NEDD1-203ENST00000429527 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
NEDD1-203ENST00000429527 PRB2P02812 416 aaPredicted RBP6.86□□□□□ -1.31
NEDD1-203ENST00000429527 CKS1BP61024 79 aa6.86□□□□□ -1.31
NEDD1-203ENST00000429527 SRSF9Q13242 221 aaKnown RBP eCLIP6.86□□□□□ -1.31
NEDD1-203ENST00000429527 TIRAPP58753 221 aa6.86□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV1-58A0A0C4DH39 117 aa6.86□□□□□ -1.31
NEDD1-203ENST00000429527 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV3OR16-13A0A075B7E8 117 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV3-74A0A0B4J1X5 117 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 A4D1N5 150 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 PSMB2P49721 201 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 ZFAND6Q6FIF0 208 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV3-49A0A0A0MS15 119 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 F6UB75 175 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 SLC25A20O43772 301 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 IGHV4-30-4P0DP06 118 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 MIAQ16674 131 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 CHCHD7Q9BUK0 85 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 NACAE9PAV3 2078 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
NEDD1-203ENST00000429527 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
NEDD1-203ENST00000429527 IGLV5-39A0A0G2JS06 123 aa6.84□□□□□ -1.31
NEDD1-203ENST00000429527 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
NEDD1-203ENST00000429527 LINC01620Q4KN68 170 aa6.84□□□□□ -1.31
NEDD1-203ENST00000429527 VSIG2Q96IQ7 327 aa6.84□□□□□ -1.31
NEDD1-203ENST00000429527 JPT2Q9H910 190 aa6.84□□□□□ -1.31
NEDD1-203ENST00000429527 KIR2DL5BQ8NHK3 375 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 UBE2D4Q9Y2X8 147 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 WNK1Q9H4A3 2382 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 SNRPD3P62318 126 aaKnown RBP6.83□□□□□ -1.32
NEDD1-203ENST00000429527 NDUFA1O15239 70 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
NEDD1-203ENST00000429527 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
NEDD1-203ENST00000429527 TRBV7-7A0A0K0K1E9 115 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 LST1O00453 97 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 SCGB1C2P0DMR2 95 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1BA6NDE4 496 aaKnown RBP6.82□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1EA6NEQ0 496 aaKnown RBP6.82□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1DP0C7P1 496 aaKnown RBP6.82□□□□□ -1.32
NEDD1-203ENST00000429527 DEFB1P60022 68 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 TMEM61Q8N0U2 210 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
NEDD1-203ENST00000429527 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
NEDD1-203ENST00000429527 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 RS1O15537 224 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
NEDD1-203ENST00000429527 TRAV12-3A0A0B4J271 114 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 TRIAP1O43715 76 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 LYSTQ99698 3801 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 A0A087WWL8 130 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 LOC107984156A0A0G2JMH3 177 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 ARL17AQ8IVW1 177 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms