RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ALKBH7Q9BT30 221 aaPredicted RBP9.72□□□□□ -0.85
SGCE-204ENST00000428696 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
SGCE-204ENST00000428696 ZNF25P17030 456 aaPredicted RBP9.71□□□□□ -0.86
SGCE-204ENST00000428696 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
SGCE-204ENST00000428696 A0A087WTM6 91 aa9.7□□□□□ -0.86
SGCE-204ENST00000428696 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SGCE-204ENST00000428696 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
SGCE-204ENST00000428696 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
SGCE-204ENST00000428696 PRR34Q9NV39 138 aa9.7□□□□□ -0.86
SGCE-204ENST00000428696 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
SGCE-204ENST00000428696 SCO1O75880 301 aa9.69□□□□□ -0.86
SGCE-204ENST00000428696 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
SGCE-204ENST00000428696 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
SGCE-204ENST00000428696 YPEL4Q96NS1 127 aa9.69□□□□□ -0.86
SGCE-204ENST00000428696 DNAH17Q9UFH2 4485 aa9.69□□□□□ -0.86
SGCE-204ENST00000428696 FAT2Q9NYQ8 4349 aa9.68□□□□□ -0.86
SGCE-204ENST00000428696 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
SGCE-204ENST00000428696 FA2HQ7L5A8 372 aa9.68□□□□□ -0.86
SGCE-204ENST00000428696 MRPL52Q86TS9 123 aaKnown RBP9.68□□□□□ -0.86
SGCE-204ENST00000428696 CDC42SE2Q9NRR3 84 aa9.68□□□□□ -0.86
SGCE-204ENST00000428696 UBE2D4Q9Y2X8 147 aa9.68□□□□□ -0.86
SGCE-204ENST00000428696 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
SGCE-204ENST00000428696 MAPKAPK5-AS1Q8N8E1 139 aa9.67□□□□□ -0.86
SGCE-204ENST00000428696 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
SGCE-204ENST00000428696 A0A1B0GVY2 172 aa9.66□□□□□ -0.86
SGCE-204ENST00000428696 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
SGCE-204ENST00000428696 CYSLTR1Q9Y271 337 aa9.66□□□□□ -0.86
SGCE-204ENST00000428696 TRAV13-1A0A0B4J241 112 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 XCL1P47992 114 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 SS18Q15532 418 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 Q6ZUT4 128 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
SGCE-204ENST00000428696 C16orf90A8MZG2 172 aa9.65□□□□□ -0.87
SGCE-204ENST00000428696 G0S2P27469 103 aa9.65□□□□□ -0.87
SGCE-204ENST00000428696 WFDC2Q14508 124 aa9.65□□□□□ -0.87
SGCE-204ENST00000428696 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.87
SGCE-204ENST00000428696 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.87
SGCE-204ENST00000428696 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.87
SGCE-204ENST00000428696 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
SGCE-204ENST00000428696 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 K7EMI3 77 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 CCL25O15444 150 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 TRGC2P03986 189 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 Q8N814 137 aa9.64□□□□□ -0.87
SGCE-204ENST00000428696 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
SGCE-204ENST00000428696 A6NJY4 79 aa9.63□□□□□ -0.87
SGCE-204ENST00000428696 COLCA2A8K830 154 aa9.63□□□□□ -0.87
SGCE-204ENST00000428696 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
SGCE-204ENST00000428696 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
SGCE-204ENST00000428696 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
SGCE-204ENST00000428696 Q6ZN92 141 aa9.62□□□□□ -0.87
SGCE-204ENST00000428696 SCGB3A1Q96QR1 104 aa9.62□□□□□ -0.87
SGCE-204ENST00000428696 PKD1P98161 4303 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 LINC00614P0C842 121 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
SGCE-204ENST00000428696 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 VCX2Q9H322 139 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
SGCE-204ENST00000428696 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
SGCE-204ENST00000428696 RAB5BP61020 215 aa9.6□□□□□ -0.87
SGCE-204ENST00000428696 ZC2HC1BQ5TFG8 222 aa9.6□□□□□ -0.87
SGCE-204ENST00000428696 BAGE3Q86Y29 109 aa9.6□□□□□ -0.87
SGCE-204ENST00000428696 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
SGCE-204ENST00000428696 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
SGCE-204ENST00000428696 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 HECTD4Q9Y4D8 3996 aa9.59□□□□□ -0.87
SGCE-204ENST00000428696 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
SGCE-204ENST00000428696 S100A1P23297 94 aa9.58□□□□□ -0.88
SGCE-204ENST00000428696 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
SGCE-204ENST00000428696 TEX43Q6ZNM6 134 aa9.58□□□□□ -0.88
SGCE-204ENST00000428696 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
SGCE-204ENST00000428696 MALP21145 153 aa9.57□□□□□ -0.88
SGCE-204ENST00000428696 FOXI1Q12951 378 aa9.57□□□□□ -0.88
SGCE-204ENST00000428696 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
SGCE-204ENST00000428696 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 NDUFA6P56556 154 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 CD164L2Q6UWJ8 174 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 ERASQ7Z444 233 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 C5orf38Q86SI9 138 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 URB1-AS1Q96HZ7 61 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 COX7A2LO14548 114 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 PRSS1P07477 247 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 GCSHP23434 173 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 PAPPA-AS1Q5QFB9 102 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
SGCE-204ENST00000428696 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
SGCE-204ENST00000428696 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
SGCE-204ENST00000428696 NTN5Q8WTR8 489 aaPredicted RBP9.55□□□□□ -0.88
SGCE-204ENST00000428696 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms