RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
UPK3BP1-201ENST00000428678 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
UPK3BP1-201ENST00000428678 HMSDA8MTL9 139 aa11.21□□□□□ -0.61
UPK3BP1-201ENST00000428678 BCL2P10415 239 aa11.21□□□□□ -0.61
UPK3BP1-201ENST00000428678 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.61
UPK3BP1-201ENST00000428678 ZNF664Q8N3J9 261 aa11.21□□□□□ -0.61
UPK3BP1-201ENST00000428678 MRAP2Q96G30 205 aa11.21□□□□□ -0.61
UPK3BP1-201ENST00000428678 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
UPK3BP1-201ENST00000428678 TMEM242Q9NWH2 141 aa11.2□□□□□ -0.62
UPK3BP1-201ENST00000428678 TSHBP01222 138 aa11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 ESDP10768 282 aa11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 MALP21145 153 aa11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 C9orf116Q5BN46 136 aaPredicted RBP11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
UPK3BP1-201ENST00000428678 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
UPK3BP1-201ENST00000428678 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
UPK3BP1-201ENST00000428678 K7EN84 100 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 APOMO95445 188 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 MRPL52Q86TS9 123 aaKnown RBP11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
UPK3BP1-201ENST00000428678 COX7A2LO14548 114 aa11.16□□□□□ -0.62
UPK3BP1-201ENST00000428678 PHF5AQ7RTV0 110 aaKnown RBP11.16□□□□□ -0.62
UPK3BP1-201ENST00000428678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.15□□□□□ -0.62
UPK3BP1-201ENST00000428678 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
UPK3BP1-201ENST00000428678 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
UPK3BP1-201ENST00000428678 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
UPK3BP1-201ENST00000428678 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
UPK3BP1-201ENST00000428678 MUC2Q02817 5179 aa11.13□□□□□ -0.63
UPK3BP1-201ENST00000428678 FAM210AQ96ND0 272 aa11.13□□□□□ -0.63
UPK3BP1-201ENST00000428678 GATCO43716 136 aaKnown RBP11.12□□□□□ -0.63
UPK3BP1-201ENST00000428678 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
UPK3BP1-201ENST00000428678 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
UPK3BP1-201ENST00000428678 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
UPK3BP1-201ENST00000428678 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
UPK3BP1-201ENST00000428678 C5orf38Q86SI9 138 aa11.11□□□□□ -0.63
UPK3BP1-201ENST00000428678 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 TRBV27A0A0K0K1C4 114 aa11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 A8MWL6 223 aa11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 POLR2KP53803 58 aaKnown RBP11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
UPK3BP1-201ENST00000428678 A0A087WZ39 114 aa11.09□□□□□ -0.63
UPK3BP1-201ENST00000428678 FCER1GP30273 86 aa11.09□□□□□ -0.63
UPK3BP1-201ENST00000428678 H0Y9J4 135 aa11.08□□□□□ -0.64
UPK3BP1-201ENST00000428678 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
UPK3BP1-201ENST00000428678 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
UPK3BP1-201ENST00000428678 PRR4Q16378 134 aa11.07□□□□□ -0.64
UPK3BP1-201ENST00000428678 IGLV1-50A0A075B6I6 118 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 CSDC2Q9Y534 153 aaKnown RBP11.06□□□□□ -0.64
UPK3BP1-201ENST00000428678 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 FAM168BA1KXE4 195 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 SMKR1H3BMG3 65 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 VCYO14598 125 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 RAB4AP20338 218 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 Q6ZUT4 128 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
UPK3BP1-201ENST00000428678 CT83Q5H943 113 aa11.04□□□□□ -0.64
UPK3BP1-201ENST00000428678 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
UPK3BP1-201ENST00000428678 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
UPK3BP1-201ENST00000428678 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
UPK3BP1-201ENST00000428678 UBE2D1P51668 147 aa11.03□□□□□ -0.64
UPK3BP1-201ENST00000428678 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
UPK3BP1-201ENST00000428678 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
UPK3BP1-201ENST00000428678 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
UPK3BP1-201ENST00000428678 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
UPK3BP1-201ENST00000428678 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
UPK3BP1-201ENST00000428678 NDUFA1O15239 70 aa11.01□□□□□ -0.65
UPK3BP1-201ENST00000428678 KRTAP1-4P0C5Y4 121 aa11.01□□□□□ -0.65
UPK3BP1-201ENST00000428678 CEBPGP53567 150 aa11.01□□□□□ -0.65
UPK3BP1-201ENST00000428678 KRTAP9-2Q9BYQ4 174 aa11.01□□□□□ -0.65
UPK3BP1-201ENST00000428678 TMEM250H0YL14 139 aa11□□□□□ -0.65
UPK3BP1-201ENST00000428678 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
UPK3BP1-201ENST00000428678 PPP1R17O96001 155 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 UBE2BP63146 152 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 GAGE2EQ4V326 116 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 C10orf25Q5T742 122 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 NRACQ8N912 160 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 TMEM18Q96B42 140 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 GAGE2DQ9UEU5 116 aa10.99□□□□□ -0.65
UPK3BP1-201ENST00000428678 F8WDY8 70 aa10.98□□□□□ -0.65
UPK3BP1-201ENST00000428678 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
UPK3BP1-201ENST00000428678 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
UPK3BP1-201ENST00000428678 SLC51BQ86UW2 128 aa10.98□□□□□ -0.65
UPK3BP1-201ENST00000428678 M0QXV9 152 aa10.97□□□□□ -0.65
UPK3BP1-201ENST00000428678 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
UPK3BP1-201ENST00000428678 PPP1R2P9O14990 202 aa10.96□□□□□ -0.65
UPK3BP1-201ENST00000428678 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms