RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 GATD1Q8NB37 220 aa8.26□□□□□ -1.09
PDE6D-203ENST00000428104 RPL39LQ96EH5 51 aaKnown RBP8.26□□□□□ -1.09
PDE6D-203ENST00000428104 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
PDE6D-203ENST00000428104 TRGC1P0CF51 173 aa8.25□□□□□ -1.09
PDE6D-203ENST00000428104 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
PDE6D-203ENST00000428104 TCEAL7Q9BRU2 100 aa8.25□□□□□ -1.09
PDE6D-203ENST00000428104 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
PDE6D-203ENST00000428104 TSHBP01222 138 aa8.24□□□□□ -1.09
PDE6D-203ENST00000428104 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
PDE6D-203ENST00000428104 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
PDE6D-203ENST00000428104 G3V3Q6 166 aa8.23□□□□□ -1.09
PDE6D-203ENST00000428104 FHITP49789 147 aa8.23□□□□□ -1.09
PDE6D-203ENST00000428104 MT1HP80294 61 aa8.23□□□□□ -1.09
PDE6D-203ENST00000428104 C10orf25Q5T742 122 aa8.23□□□□□ -1.09
PDE6D-203ENST00000428104 CCDC32Q9BV29 185 aa8.23□□□□□ -1.09
PDE6D-203ENST00000428104 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
PDE6D-203ENST00000428104 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
PDE6D-203ENST00000428104 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
PDE6D-203ENST00000428104 MZT2BQ6NZ67 158 aa8.22□□□□□ -1.09
PDE6D-203ENST00000428104 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 S100A9P06702 114 aaKnown RBP8.21□□□□□ -1.1
PDE6D-203ENST00000428104 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
PDE6D-203ENST00000428104 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 SMDT1Q9H4I9 107 aa8.21□□□□□ -1.1
PDE6D-203ENST00000428104 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
PDE6D-203ENST00000428104 MRAP2Q96G30 205 aa8.2□□□□□ -1.1
PDE6D-203ENST00000428104 CTDSP1Q9GZU7 261 aa8.2□□□□□ -1.1
PDE6D-203ENST00000428104 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
PDE6D-203ENST00000428104 ALG5Q9Y673 324 aa8.2□□□□□ -1.1
PDE6D-203ENST00000428104 SSNA1O43805 119 aa8.19□□□□□ -1.1
PDE6D-203ENST00000428104 PAGE4O60829 102 aa8.19□□□□□ -1.1
PDE6D-203ENST00000428104 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
PDE6D-203ENST00000428104 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
PDE6D-203ENST00000428104 MRPL52Q86TS9 123 aaKnown RBP8.19□□□□□ -1.1
PDE6D-203ENST00000428104 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
PDE6D-203ENST00000428104 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 F2Z2F3 143 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 I3L3M4 83 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 NDUFA1O15239 70 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 PMCHP20382 165 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
PDE6D-203ENST00000428104 KRTAP19-2Q3LHN2 52 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
PDE6D-203ENST00000428104 NUPR1O60356 82 aa8.17□□□□□ -1.1
PDE6D-203ENST00000428104 SEC61BP60468 96 aaKnown RBP8.17□□□□□ -1.1
PDE6D-203ENST00000428104 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
PDE6D-203ENST00000428104 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
PDE6D-203ENST00000428104 C9orf129Q5T035 196 aaKnown RBP8.17□□□□□ -1.1
PDE6D-203ENST00000428104 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
PDE6D-203ENST00000428104 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
PDE6D-203ENST00000428104 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
PDE6D-203ENST00000428104 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
PDE6D-203ENST00000428104 TWIST1Q15672 202 aa8.15□□□□□ -1.1
PDE6D-203ENST00000428104 LINC00242Q5T6M2 205 aa8.15□□□□□ -1.1
PDE6D-203ENST00000428104 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
PDE6D-203ENST00000428104 F8WDY8 70 aa8.14□□□□□ -1.11
PDE6D-203ENST00000428104 FOXA3P55318 350 aaPredicted RBP8.14□□□□□ -1.11
PDE6D-203ENST00000428104 TMEM241Q24JQ0 296 aa8.14□□□□□ -1.11
PDE6D-203ENST00000428104 TMUB2Q71RG4 321 aa8.14□□□□□ -1.11
PDE6D-203ENST00000428104 IFNA1P01562 189 aa8.13□□□□□ -1.11
PDE6D-203ENST00000428104 CTRLP40313 264 aa8.13□□□□□ -1.11
PDE6D-203ENST00000428104 RPL35P42766 123 aaKnown RBP8.13□□□□□ -1.11
PDE6D-203ENST00000428104 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
PDE6D-203ENST00000428104 C7orf77A4D0Y5 90 aa8.12□□□□□ -1.11
PDE6D-203ENST00000428104 BCE1O60756 84 aa8.12□□□□□ -1.11
PDE6D-203ENST00000428104 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
PDE6D-203ENST00000428104 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
PDE6D-203ENST00000428104 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
PDE6D-203ENST00000428104 PFDN1O60925 122 aa8.11□□□□□ -1.11
PDE6D-203ENST00000428104 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
PDE6D-203ENST00000428104 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
PDE6D-203ENST00000428104 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
PDE6D-203ENST00000428104 A0A1B0GV50 99 aa8.1□□□□□ -1.11
PDE6D-203ENST00000428104 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
PDE6D-203ENST00000428104 CTAG1AP78358 180 aa8.1□□□□□ -1.11
PDE6D-203ENST00000428104 Q6ZUT4 128 aa8.1□□□□□ -1.11
PDE6D-203ENST00000428104 BORCS7-ASMTA0A0B4J1R7 106 aa8.09□□□□□ -1.11
PDE6D-203ENST00000428104 CENPWQ5EE01 88 aa8.09□□□□□ -1.11
PDE6D-203ENST00000428104 TEX261Q6UWH6 196 aa8.09□□□□□ -1.11
PDE6D-203ENST00000428104 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
PDE6D-203ENST00000428104 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
PDE6D-203ENST00000428104 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
PDE6D-203ENST00000428104 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
PDE6D-203ENST00000428104 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
PDE6D-203ENST00000428104 LBHQ53QV2 105 aaPredicted RBP8.07□□□□□ -1.12
PDE6D-203ENST00000428104 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
PDE6D-203ENST00000428104 MARVELD1Q9BSK0 173 aa8.07□□□□□ -1.12
PDE6D-203ENST00000428104 CYTL1Q9NRR1 136 aa8.07□□□□□ -1.12
PDE6D-203ENST00000428104 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
PDE6D-203ENST00000428104 USH2AO75445 5202 aa8.07□□□□□ -1.12
PDE6D-203ENST00000428104 KIAA0087Q14695 138 aa8.06□□□□□ -1.12
PDE6D-203ENST00000428104 Q5BKY6 102 aa8.06□□□□□ -1.12
PDE6D-203ENST00000428104 SMIM15Q7Z3B0 74 aa8.06□□□□□ -1.12
PDE6D-203ENST00000428104 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
PDE6D-203ENST00000428104 SFT2D1Q8WV19 159 aa8.06□□□□□ -1.12
PDE6D-203ENST00000428104 TRBV30A0A0K0K1B3 111 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 498.3 ms