RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 LY6LH3BQJ8 138 aa9.77□□□□□ -0.85
SPG11-202ENST00000427534 AVPP01185 164 aa9.77□□□□□ -0.85
SPG11-202ENST00000427534 K7EQG2 157 aa9.77□□□□□ -0.85
SPG11-202ENST00000427534 CXCL5P42830 114 aa9.77□□□□□ -0.85
SPG11-202ENST00000427534 TMEM258P61165 79 aa9.77□□□□□ -0.85
SPG11-202ENST00000427534 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 FSTL3O95633 263 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 ODF1Q14990 250 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
SPG11-202ENST00000427534 E9PLD3 99 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 C11orf71Q6IPW1 123 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 TRBV6-8A0A0A6YYG3 113 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 PRRC2AP48634 2157 aaKnown RBP9.75□□□□□ -0.85
SPG11-202ENST00000427534 A0A0J9YXY3 114 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 PRR4Q16378 134 aa9.75□□□□□ -0.85
SPG11-202ENST00000427534 TMEM256-PLSCR3K7ERE1 68 aa9.74□□□□□ -0.85
SPG11-202ENST00000427534 BPY2O14599 106 aa9.74□□□□□ -0.85
SPG11-202ENST00000427534 UFSP1Q6NVU6 142 aa9.74□□□□□ -0.85
SPG11-202ENST00000427534 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
SPG11-202ENST00000427534 RAI1Q7Z5J4 1906 aaPredicted RBP9.74□□□□□ -0.85
SPG11-202ENST00000427534 EXPH5Q8NEV8 1989 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 MIFP14174 115 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 X6R8D5 127 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 UBE2D2P62837 147 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 ALPK3Q96L96 1907 aa9.73□□□□□ -0.85
SPG11-202ENST00000427534 TCL1BO95988 128 aa9.72□□□□□ -0.85
SPG11-202ENST00000427534 NDUFA7O95182 113 aa9.72□□□□□ -0.85
SPG11-202ENST00000427534 EBI3Q14213 229 aa9.72□□□□□ -0.85
SPG11-202ENST00000427534 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
SPG11-202ENST00000427534 MIAQ16674 131 aa9.72□□□□□ -0.85
SPG11-202ENST00000427534 PRR9Q5T870 116 aa9.71□□□□□ -0.85
SPG11-202ENST00000427534 ENHOQ6UWT2 76 aa9.71□□□□□ -0.86
SPG11-202ENST00000427534 NUPR2A6NF83 97 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 HIVEP3Q5T1R4 2406 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 ANKHD1Q8IWZ3 2542 aaKnown RBP9.7□□□□□ -0.86
SPG11-202ENST00000427534 CRIP1P50238 77 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 ODF3Q96PU9 254 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 CSPG4Q6UVK1 2322 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
SPG11-202ENST00000427534 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
SPG11-202ENST00000427534 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
SPG11-202ENST00000427534 C10orf142B7Z368 130 aa9.69□□□□□ -0.86
SPG11-202ENST00000427534 C6orf99Q4VX62 202 aa9.69□□□□□ -0.86
SPG11-202ENST00000427534 C3orf22Q8N5N4 141 aa9.69□□□□□ -0.86
SPG11-202ENST00000427534 NOTCH2Q04721 2471 aa9.69□□□□□ -0.86
SPG11-202ENST00000427534 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 ACACBO00763 2458 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 COL5A1P20908 1838 aaPredicted RBP9.68□□□□□ -0.86
SPG11-202ENST00000427534 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 RBX1P62877 108 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 MBD6Q96DN6 1003 aa9.68□□□□□ -0.86
SPG11-202ENST00000427534 SPG11Q96JI7 2443 aa9.67□□□□□ -0.86
SPG11-202ENST00000427534 SORL1Q92673 2214 aa9.67□□□□□ -0.86
SPG11-202ENST00000427534 JMJD7-PLA2G4BH0Y9G9 81 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
SPG11-202ENST00000427534 CRIP2P52943 208 aaPredicted RBP9.66□□□□□ -0.86
SPG11-202ENST00000427534 GAS8-AS1O95177 125 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 BRK1Q8WUW1 75 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 CCKP06307 115 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
SPG11-202ENST00000427534 ATRXP46100 2492 aa9.65□□□□□ -0.86
SPG11-202ENST00000427534 IGLV4-69A0A075B6H9 119 aa9.65□□□□□ -0.86
SPG11-202ENST00000427534 M0QY20 66 aa9.65□□□□□ -0.86
SPG11-202ENST00000427534 Q6ZTC4 211 aa9.65□□□□□ -0.87
SPG11-202ENST00000427534 EP400Q96L91 3159 aa9.65□□□□□ -0.87
SPG11-202ENST00000427534 G3V4G9 280 aa9.65□□□□□ -0.87
SPG11-202ENST00000427534 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.87
SPG11-202ENST00000427534 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
SPG11-202ENST00000427534 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
SPG11-202ENST00000427534 KIR2DL5BQ8NHK3 375 aa9.64□□□□□ -0.87
SPG11-202ENST00000427534 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
SPG11-202ENST00000427534 SNURFQ9Y675 71 aa9.63□□□□□ -0.87
SPG11-202ENST00000427534 MUC22E2RYF6 1773 aaPredicted RBP9.63□□□□□ -0.87
SPG11-202ENST00000427534 SMIM20Q8N5G0 67 aa9.63□□□□□ -0.87
SPG11-202ENST00000427534 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
SPG11-202ENST00000427534 TRBV6-5A0A0K0K1A5 114 aa9.63□□□□□ -0.87
SPG11-202ENST00000427534 Q8N6K4 173 aa9.62□□□□□ -0.87
SPG11-202ENST00000427534 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
SPG11-202ENST00000427534 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
SPG11-202ENST00000427534 DEFB116Q30KQ4 102 aa9.61□□□□□ -0.87
SPG11-202ENST00000427534 LINC01556Q5JQF7 62 aa9.61□□□□□ -0.87
SPG11-202ENST00000427534 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
SPG11-202ENST00000427534 M0QXV9 152 aa9.61□□□□□ -0.87
SPG11-202ENST00000427534 C11orf21Q9P2W6 132 aa9.61□□□□□ -0.87
SPG11-202ENST00000427534 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 ATOX1O00244 68 aa9.6□□□□□ -0.87
SPG11-202ENST00000427534 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms