RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
HDAC6-206ENST00000426196 UBE2BP63146 152 aa8.39□□□□□ -1.07
HDAC6-206ENST00000426196 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
HDAC6-206ENST00000426196 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-206ENST00000426196 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
HDAC6-206ENST00000426196 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
HDAC6-206ENST00000426196 C1orf196B1AJZ1 125 aa8.38□□□□□ -1.07
HDAC6-206ENST00000426196 PMCHP20382 165 aa8.38□□□□□ -1.07
HDAC6-206ENST00000426196 TWIST1Q15672 202 aa8.38□□□□□ -1.07
HDAC6-206ENST00000426196 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
HDAC6-206ENST00000426196 I3L3M4 83 aa8.37□□□□□ -1.07
HDAC6-206ENST00000426196 IFITM3Q01628 133 aa8.37□□□□□ -1.07
HDAC6-206ENST00000426196 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
HDAC6-206ENST00000426196 TEX261Q6UWH6 196 aa8.37□□□□□ -1.07
HDAC6-206ENST00000426196 SFT2D1Q8WV19 159 aa8.37□□□□□ -1.07
HDAC6-206ENST00000426196 FXYD6-FXYD2A0A087WZ82 144 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 A0A1B0GV50 99 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 G3V3Q6 166 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 M0QXV9 152 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 CTRLP40313 264 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
HDAC6-206ENST00000426196 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
HDAC6-206ENST00000426196 RPP21Q9H633 154 aaKnown RBP8.36□□□□□ -1.07
HDAC6-206ENST00000426196 Q5BKY6 102 aa8.35□□□□□ -1.07
HDAC6-206ENST00000426196 SMIM15Q7Z3B0 74 aa8.35□□□□□ -1.07
HDAC6-206ENST00000426196 C9orf62Q8N4C0 152 aa8.35□□□□□ -1.07
HDAC6-206ENST00000426196 KCNRGQ8N5I3 272 aa8.35□□□□□ -1.07
HDAC6-206ENST00000426196 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
HDAC6-206ENST00000426196 TPRXLQ17RH7 258 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 FAM210AQ96ND0 272 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 NDUFA13Q9P0J0 144 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 ALG5Q9Y673 324 aa8.34□□□□□ -1.07
HDAC6-206ENST00000426196 ZNF861PO60384 105 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 TSHBP01222 138 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-206ENST00000426196 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 SMIM12Q96EX1 92 aa8.33□□□□□ -1.08
HDAC6-206ENST00000426196 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 F8WDY8 70 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 NDUFA1O15239 70 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 GAGE2EQ4V326 116 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 GAGE2DQ9UEU5 116 aa8.32□□□□□ -1.08
HDAC6-206ENST00000426196 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
HDAC6-206ENST00000426196 GIPP09681 153 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-206ENST00000426196 GNG4P50150 75 aa8.31□□□□□ -1.08
HDAC6-206ENST00000426196 BIN3Q9NQY0 253 aa8.31□□□□□ -1.08
HDAC6-206ENST00000426196 A0A087X002 238 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 CRYGAP11844 174 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 SMAGPQ0VAQ4 97 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 ORAOV1Q8WV07 137 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 SMDT1Q9H4I9 107 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
HDAC6-206ENST00000426196 UMAD1C9J7I0 102 aa8.29□□□□□ -1.08
HDAC6-206ENST00000426196 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
HDAC6-206ENST00000426196 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
HDAC6-206ENST00000426196 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
HDAC6-206ENST00000426196 CYTL1Q9NRR1 136 aa8.29□□□□□ -1.08
HDAC6-206ENST00000426196 IGLV7-46A0A075B6I9 117 aa8.28□□□□□ -1.08
HDAC6-206ENST00000426196 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
HDAC6-206ENST00000426196 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-206ENST00000426196 CCL20P78556 96 aa8.28□□□□□ -1.08
HDAC6-206ENST00000426196 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
HDAC6-206ENST00000426196 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
HDAC6-206ENST00000426196 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
HDAC6-206ENST00000426196 NUPR1O60356 82 aa8.27□□□□□ -1.09
HDAC6-206ENST00000426196 H2AFB1P0C5Y9 115 aa8.27□□□□□ -1.09
HDAC6-206ENST00000426196 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
HDAC6-206ENST00000426196 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
HDAC6-206ENST00000426196 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
HDAC6-206ENST00000426196 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
HDAC6-206ENST00000426196 FCER1GP30273 86 aa8.25□□□□□ -1.09
HDAC6-206ENST00000426196 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
HDAC6-206ENST00000426196 ARPC5O15511 151 aa8.24□□□□□ -1.09
HDAC6-206ENST00000426196 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
HDAC6-206ENST00000426196 POLR2KP53803 58 aaKnown RBP8.24□□□□□ -1.09
HDAC6-206ENST00000426196 Q6ZUT4 128 aa8.24□□□□□ -1.09
HDAC6-206ENST00000426196 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
HDAC6-206ENST00000426196 TRBV20OR9-2A0A075B6H5 130 aa8.23□□□□□ -1.09
HDAC6-206ENST00000426196 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
HDAC6-206ENST00000426196 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
HDAC6-206ENST00000426196 PDE6DO43924 150 aa8.21□□□□□ -1.1
HDAC6-206ENST00000426196 C9orf129Q5T035 196 aaKnown RBP8.21□□□□□ -1.1
HDAC6-206ENST00000426196 MED9Q9NWA0 146 aa8.21□□□□□ -1.1
HDAC6-206ENST00000426196 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
HDAC6-206ENST00000426196 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms