RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.71
CLCN3P1-201ENST00000423965 THAP6Q8TBB0 222 aa4.34□□□□□ -1.71
CLCN3P1-201ENST00000423965 EPDR1Q9UM22 224 aa4.34□□□□□ -1.71
CLCN3P1-201ENST00000423965 LSM5Q9Y4Y9 91 aaKnown RBP4.34□□□□□ -1.71
CLCN3P1-201ENST00000423965 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 AP3S2P59780 193 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 COTL1Q14019 142 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 COX8CQ7Z4L0 72 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 DEDD2Q8WXF8 326 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 ARL2-SNX15V9GYD0 113 aa4.33□□□□□ -1.72
CLCN3P1-201ENST00000423965 F8WDY8 70 aa4.32□□□□□ -1.72
CLCN3P1-201ENST00000423965 CTDSP2O14595 271 aa4.32□□□□□ -1.72
CLCN3P1-201ENST00000423965 TMSB15BA0A087X1C1 80 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 SH2D1AO60880 128 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 ZNF25P17030 456 aaPredicted RBP4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 NKX2-5P52952 324 aaPredicted RBP4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 OR10AG1Q8NH19 301 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 FUNDC2Q9BWH2 189 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
CLCN3P1-201ENST00000423965 A0A1W2PPV4 95 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 G3V3Q6 166 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 COX7A2LO14548 114 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 BCE1O60756 84 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 RASL11AQ6T310 242 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 TOMM5Q8N4H5 51 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 ZFP30Q9Y2G7 519 aa4.3□□□□□ -1.72
CLCN3P1-201ENST00000423965 SNAI2O43623 268 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 CXCL1P09341 107 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 OR5AL1P0C617 328 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 GAGE2EQ4V326 116 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 LBHQ53QV2 105 aaPredicted RBP4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 TMEM101Q96IK0 257 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 BTF3L4Q96K17 158 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 AP1S3Q96PC3 154 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 SMDT1Q9H4I9 107 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 Q9H521 79 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 VCX3AQ9NNX9 186 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 GAGE2DQ9UEU5 116 aa4.29□□□□□ -1.72
CLCN3P1-201ENST00000423965 NDUFB6O95139 128 aa4.28□□□□□ -1.72
CLCN3P1-201ENST00000423965 NCR2O95944 276 aa4.28□□□□□ -1.72
CLCN3P1-201ENST00000423965 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
CLCN3P1-201ENST00000423965 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
CLCN3P1-201ENST00000423965 C1orf196B1AJZ1 125 aa4.27□□□□□ -1.73
CLCN3P1-201ENST00000423965 NTF3P20783 257 aa4.27□□□□□ -1.73
CLCN3P1-201ENST00000423965 SPAG11BQ08648 103 aa4.27□□□□□ -1.73
CLCN3P1-201ENST00000423965 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
CLCN3P1-201ENST00000423965 Q86TA4 180 aa4.27□□□□□ -1.73
CLCN3P1-201ENST00000423965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 IGKV2-29A2NJV5 120 aaPredicted RBP4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 FAM25EA8MYX2 175 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 NDUFA1O15239 70 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 MGPP08493 103 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 IL15RAQ13261 267 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 OR10D4PQ8NGN7 298 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 CYTL1Q9NRR1 136 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 CDC42SE2Q9NRR3 84 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
CLCN3P1-201ENST00000423965 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 A0A1W2PRE2 83 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 HMGB3O15347 200 aaKnown RBP4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 STAG3L2P0CL84 134 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 STAG3L3P0CL85 134 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 TMEM167BQ9NRX6 74 aa4.25□□□□□ -1.73
CLCN3P1-201ENST00000423965 A0A087WXM4 84 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 PRSS47A8MTI9 375 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 SPINK1P00995 79 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 APCSP02743 223 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 GCHFRP30047 84 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 CTRLP40313 264 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 SSTP61278 116 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 SCGB1C1Q8TD33 95 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 HIST1H2BAQ96A08 127 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 C6orf48Q9UBA6 75 aa4.24□□□□□ -1.73
CLCN3P1-201ENST00000423965 PEX7O00628 323 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 LRRC37A5PQ49AS3 106 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 UNQ6190/PRO20217Q6UXQ8 127 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 KRTAP13-1Q8IUC0 172 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 FAM19A2Q8N3H0 131 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 C3orf22Q8N5N4 141 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 PACRGQ96M98 296 aaPredicted RBP4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 TP73-AS1Q9UF72 201 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 ALG5Q9Y673 324 aa4.23□□□□□ -1.73
CLCN3P1-201ENST00000423965 NAP1L6A6NFF2 107 aa4.22□□□□□ -1.73
CLCN3P1-201ENST00000423965 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
CLCN3P1-201ENST00000423965 NDUFC2-KCTD14E9PQ53 114 aa4.22□□□□□ -1.73
CLCN3P1-201ENST00000423965 CNPY1Q3B7I2 92 aa4.22□□□□□ -1.73
CLCN3P1-201ENST00000423965 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
CLCN3P1-201ENST00000423965 MRPL52Q86TS9 123 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms