RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
HPS4-204ENST00000422379 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
HPS4-204ENST00000422379 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
HPS4-204ENST00000422379 DAD1P61803 113 aa6.28□□□□□ -1.4
HPS4-204ENST00000422379 MPV17L2Q567V2 206 aa6.28□□□□□ -1.4
HPS4-204ENST00000422379 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
HPS4-204ENST00000422379 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 TTTY13Q9BZ97 58 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
HPS4-204ENST00000422379 IGLV4-69A0A075B6H9 119 aa6.26□□□□□ -1.41
HPS4-204ENST00000422379 TRGV4A0A0C4DH28 118 aa6.26□□□□□ -1.41
HPS4-204ENST00000422379 HTN3P15516 51 aa6.26□□□□□ -1.41
HPS4-204ENST00000422379 PMVKQ15126 192 aa6.26□□□□□ -1.41
HPS4-204ENST00000422379 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
HPS4-204ENST00000422379 A0A0J9YY99 117 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 K7EQD1 137 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 LINC00694P0DN24 101 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 CRYBA4P53673 196 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 UBE2V1Q13404 147 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
HPS4-204ENST00000422379 CST9LQ9H4G1 147 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 IGHV3-38A0A0C4DH36 116 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 TRBV6-4A0A1B0GX49 114 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 SIVA1O15304 175 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 ATP5G1P05496 136 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 VAMP3Q15836 100 aa6.25□□□□□ -1.41
HPS4-204ENST00000422379 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 TRAV26-1A0A087WT03 109 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 F5H768 121 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 NHLRC4P0CG21 123 aaPredicted RBP6.24□□□□□ -1.41
HPS4-204ENST00000422379 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
HPS4-204ENST00000422379 GAGE4Q13068 117 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 GAGE5Q13069 117 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 GAGE13Q4V321 117 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
HPS4-204ENST00000422379 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
HPS4-204ENST00000422379 CHCHD7Q9BUK0 85 aa6.24□□□□□ -1.41
HPS4-204ENST00000422379 TRAV8-6A0A0B4J262 113 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 MAPKAPK5-AS1Q8N8E1 139 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 ZNRF2Q8NHG8 242 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 TEX48A0A1B0GUV7 120 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 E9PLD3 99 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 GYPEP15421 78 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 UBE2D3P61077 147 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 UBE2D2P62837 147 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 COTL1Q14019 142 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 PYGO1Q9Y3Y4 419 aa6.23□□□□□ -1.41
HPS4-204ENST00000422379 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 TRBV25-1A0A075B6N4 114 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 A0A096LPF7 62 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 CCL25O15444 150 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 HSD52Q0P140 79 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 CEMP1Q6PRD7 247 aaPredicted RBP6.22□□□□□ -1.41
HPS4-204ENST00000422379 NTM-AS1Q6ZSK4 140 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 Q6ZVH6 145 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
HPS4-204ENST00000422379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.41
HPS4-204ENST00000422379 DEFB131BA0A096LNP1 70 aa6.21□□□□□ -1.41
HPS4-204ENST00000422379 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.41
HPS4-204ENST00000422379 PAX4O43316 350 aa6.21□□□□□ -1.41
HPS4-204ENST00000422379 DAZ4Q86SG3 579 aaKnown RBP6.21□□□□□ -1.41
HPS4-204ENST00000422379 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.41
HPS4-204ENST00000422379 DAZ3Q9NR90 486 aaKnown RBP6.21□□□□□ -1.41
HPS4-204ENST00000422379 HIGD1BQ9P298 99 aa6.21□□□□□ -1.41
HPS4-204ENST00000422379 UBE2D4Q9Y2X8 147 aa6.21□□□□□ -1.41
HPS4-204ENST00000422379 NFE4Q86UQ8 179 aa6.21□□□□□ -1.42
HPS4-204ENST00000422379 VCX2Q9H322 139 aa6.21□□□□□ -1.42
HPS4-204ENST00000422379 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
HPS4-204ENST00000422379 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
HPS4-204ENST00000422379 AMELXQ99217 191 aa6.2□□□□□ -1.42
HPS4-204ENST00000422379 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
HPS4-204ENST00000422379 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 TAX1BP3O14907 124 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 HERVK_113P61574 105 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 SEC11AP67812 179 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 Q6ZUT4 128 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 A6NDN8 102 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 ZNF22P17026 224 aaPredicted RBP6.19□□□□□ -1.42
HPS4-204ENST00000422379 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
HPS4-204ENST00000422379 K7EP13 123 aa6.18□□□□□ -1.42
HPS4-204ENST00000422379 TSPEAR-AS2P59090 65 aa6.18□□□□□ -1.42
HPS4-204ENST00000422379 TRAV10A0A0B4J240 114 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 GCSHP23434 173 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 FXYD2P54710 66 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms