RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 ARL2-SNX15V9GYD0 113 aa2.9□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ARHGEF5Q12774 1597 aa2.9□□□□□ -1.95
PTP4A1P1-201ENST00000420539 A0A087WWC5 75 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 FAM223BA6NKX1 122 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 DNAL4O96015 105 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGLV3-19P01714 112 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 SAA2P0DJI9 122 aaPredicted RBP2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 MRC1P22897 1456 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 SPTBP11277 2137 aa2.89□□□□□ -1.95
PTP4A1P1-201ENST00000420539 BAZ2BQ9UIF8 2168 aaKnown RBP2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 SPAG17Q6Q759 2223 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 PI4KAP42356 2102 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 RPL37AP61513 92 aaKnown RBP2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 GNGT1P63211 74 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 Q86TA4 180 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ARFGEF1Q9Y6D6 1849 aa2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 PDCD11Q14690 1871 aaKnown RBP2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 COL5A3P25940 1745 aaPredicted RBP2.88□□□□□ -1.95
PTP4A1P1-201ENST00000420539 NBDYA0A0U1RRE5 68 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IL9P15248 144 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 DEFB121Q5J5C9 76 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 RREB1Q92766 1687 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ARFGEF2Q9Y6D5 1785 aa2.87□□□□□ -1.95
PTP4A1P1-201ENST00000420539 AFDNP55196 1824 aaKnown RBP2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ABCA4P78363 2273 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 TARBP1Q13395 1621 aaKnown RBP2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGLV3-32A0A0A0MS00 114 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 FAM74A4Q5TZK3 123 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGFL1Q6UW32 110 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 TXNDC17Q9BRA2 123 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 LAMA4Q16363 1823 aa2.86□□□□□ -1.95
PTP4A1P1-201ENST00000420539 BTAF1O14981 1849 aa2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 CCL18P55774 89 aa2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 FXYD3Q14802 87 aa2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 LINC00322Q6ZN03 302 aaPredicted RBP2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 COA5Q86WW8 74 aa2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 R4GMQ9 66 aa2.85□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ALPK2Q86TB3 2170 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 DOCK10Q96BY6 2186 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 RTTNQ86VV8 2226 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGKV2-40A0A087WW87 121 aaPredicted RBP2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 TRBV6-5A0A0K0K1A5 114 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGKV2-29A2NJV5 120 aaPredicted RBP2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 INE1O15225 51 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 IGKV2D-40P01614 121 aaPredicted RBP2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 ARMS2P0C7Q2 107 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 PLGLAQ15195 96 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 AMELXQ99217 191 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 PROK2Q9HC23 129 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 SCN7AQ01118 1682 aa2.84□□□□□ -1.95
PTP4A1P1-201ENST00000420539 FREM1Q5H8C1 2179 aa2.84□□□□□ -1.96
PTP4A1P1-201ENST00000420539 GBF1Q92538 1859 aa2.84□□□□□ -1.96
PTP4A1P1-201ENST00000420539 PREX2Q70Z35 1606 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 RGPD1P0DJD0 1748 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 A0A087WTM6 91 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 CEBPZOSA8MTT3 80 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 F8VRH5 84 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 SPINT3P49223 89 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 ZNF563Q8TA94 476 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 PPP1R1CQ8WVI7 109 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 PRR15LQ9BU68 103 aa2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 PRRC2BQ5JSZ5 2229 aaKnown RBP2.83□□□□□ -1.96
PTP4A1P1-201ENST00000420539 ITSN1Q15811 1721 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 PCDH15Q96QU1 1955 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 A0A1B0GWA3 101 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 LEPROTL1O95214 131 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 FXYD4P59646 89 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 C5orf56Q8N8D9 126 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 V9GYV3 84 aa2.82□□□□□ -1.96
PTP4A1P1-201ENST00000420539 SHROOM3Q8TF72 1996 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 FN1P02751 2386 aaKnown RBP2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 M0R2N4 97 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 SFTA3P0C7M3 94 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 HCP5Q6MZN7 132 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 ZNF625Q96I27 306 aaPredicted RBP2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 CYYR1Q96J86 154 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 LMTK2Q8IWU2 1503 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 LOC285556D6RIA3 1793 aa2.81□□□□□ -1.96
PTP4A1P1-201ENST00000420539 ASXL1Q8IXJ9 1541 aa2.8□□□□□ -1.96
PTP4A1P1-201ENST00000420539 M0R135 149 aa2.8□□□□□ -1.96
PTP4A1P1-201ENST00000420539 M0R3E3 92 aa2.8□□□□□ -1.96
PTP4A1P1-201ENST00000420539 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
PTP4A1P1-201ENST00000420539 C6orf201Q7Z4U5 140 aa2.8□□□□□ -1.96
PTP4A1P1-201ENST00000420539 ADGRB2O60241 1585 aa2.79□□□□□ -1.96
PTP4A1P1-201ENST00000420539 D6R8Y8 96 aa2.79□□□□□ -1.96
PTP4A1P1-201ENST00000420539 Q6JHZ5 121 aa2.79□□□□□ -1.96
PTP4A1P1-201ENST00000420539 MUSTN1Q8IVN3 82 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms